| Visitors: | 312927 |
|---|---|
| # of TMPs: | 15327 |
| Server version: | v2.0.0 |
| Database release: | d.2.2 |
| Release date: | 22.07.2024 |
HTP viewer for A0A8B1J077_SARS2
A0A8B1J077_SARS2
ORF1a polyprotein
Evidence:
Prediction
Reliability:
64.78
# of TM segments:
17
Cross ref(s)::
UniProt: A0A8B1J077_SARS2
MESLVPGFNEKTHVQLSLPVLQVRDVLVRGFGDSVEEVLSEARQHLKDGT CGLVEVEKGVLPQLEQPYVFIKRSDARTAPHGHVVELVAELEGIQYGRSG ETLGVLVPHVGEIPVAYRKVLLRKNGNKGAGGHSYGADLKSFDLGDELGT DPYEDFQENWNTKHSSGVTRELMRELNGGAYTRYVDNNFCGPDGYPLECI KDLLARAGKASCTLSEQLDFIDTKRGVYCCREHEHEIAWYTERSEKSYEL QTPFEIKLAKKFDIFNGECPNFVFPLNSIIKTIQPRVEKKKLDGFMGRIR SVYPVASPNECNQMCLSTLMKCDHCGETSWQTGDFVKATCEFCGTENLTK EGATTCGYLPQNAVVKIYCPACHNSEVGPEHSLAEYHNESGLKTILRKGG RTIAFGGCVFSYVGCHNKCAYWVPRASANIGCNHTGVVGEGSEGLNDNLL EILQKEKVNINIVGDFKLNEEIAIILASFSASTSAFVETVKGLDYKAFKQ IVESCGNFKVTKGKAKKGAWNIGEQKSILSPLYAFASEAARVVRSIFSRT LETAQNSVRVLQKAAITILDGISQYSLRLIDAMMFTSDLATNNLVVMAYI TGGVVQLTSQWLTNIFGTVYEKLKPVLDWLEEKFKEGVEFLRDGWEIVKF ISTCACEIVGGQIVTCAKEIKESVQTFFKLVNKFLALCADSIIIGGAKLK ALNLGETFVTHSKGLYRKCVKSREETGLLMPLKAPKEIIFLEGETLPTEV LTEEVVLKTGDLQPLEQPTSEAVEAPLVGTPVCINGLMLLEIKDTEKYCA LAPNMMVTNNTFTLKGGAPTKVTFGDDTVIEVQGYKSVNITFELDERIDK VLNEKCSAYTVELGTEVNEFACVVADAVIKTLQPVSELLTPLGIDLDEWS MATYYLFDESGEFKLASHMYCSFYPPDEDEEEGDCEEEEFEPSTQYEYGT EDDYQGKPLEFGATSAALQPEEEQEEDWLDDDSQQTVGQQDGSEDNQTTT IQTIVEVQPQLEMELTPVVQTIEVNSFSGYLKLTDNVYIKNADIVEEAKK VKPTVVVNAANVYLKHGGGVAGALNKATNNAMQVESDDYIATNGPLKVGG SCVLSGHNLAKHCLHVVGPNVNKGEDIQLLKSAYENFNQHEVLLAPLLSA GIFGADPIHSLRVCVDTVRTNVYLAVFDKNLYDKLVSSFLEMKSEKQVEQ KIAEIPKEEVKPFITESKPSVEQRKQDDKKIKACVEEVTTTLEETKFLTE NLLLYIDINGNLHPDSATLVSDIDITFLKKDAPYIVGDVVQEGVLTAVVI PTKKAGGTTEMLAKALRKVPTDNYITTYPGQGLNGYTVEEAKTVLKKCKS AFYILPSIISNEKQEILGTVSWNLREMLAHAEETRKLMPVCVETKAIVST IQRKYKGIKIQEGVVDYGARFYFYTSKTTVASLINTLNDLNETLVTMPLG YVTHGLNLEEAARYMRSLKVPATVSVSSPDAVTAYNGYLTSSSKTPEEHF IETISLAGSYKDWSYSGQSTQLGIEFLKRGDKSVYYTSNPTTFHLDGEVI TFDNLKTLLSLREVRTIKVFTTVDNINLHTQVVDMSMTYGQQFGPTYLDG ADVTKIKPHNSHEGKTFYVLPNDDTLRVEAFEYYHTTDPSFLGRYMSALN HTKKWKYPQVNGLTSIKWADNNCYLATALLTLQQIELKFNPPALQDAYYR ARAGEAANFCALILAYCNKTVGELGDVRETMSYLFQHANLDSCKRVLNVV CKTCGQQQTTLKGVEAVMYMGTLSYEQFKKGVQIPCTCGKQATKYLVQQE SPFVMMSAPPAQYELKHGTFTCASEYTGNYQCGHYKHITSKETLYCIDGA LLTKSSEYKGPITDVFYKENSYTTTIKPVTYKLDGVVCTEIDPKLDNYYK KDNSYFTEQPIDLVPNQPYPNASFDNFKFVCDNIKFADDLNQLTGYKKPA SRELKVTFFPDLNGDVVAIDYKHYTPSFKKGAKLLHKPIVWHVNNATNKA TYKPNTWCIRCLWSTKPVETSNSFDVLKSEDAQGMDNLACEDLKPVSEEV VENPTIQKDVLECNVKTTEVVGDIILKPANNSLKITEEVGHTDLMAAYVD NSSLTIKKPNELSRVLGLKTLATHGLAAVNSVPWDTIANYAKPFLNKVVS TTTNIVTRCLNRVCTNYMPYFFTLLLQLCTFTRSTNSRIKASMPTTIAKN TVKSVGKFCLEASFNYLKSPNFSKLINIIIWFLLLSVCLGSLIYSTAALG VLMSNLGMPSYCTGYREGYLNSTNVTIATYCTGSIPCSVCLSGLDSLDTY PSLETIQITISSFKWDLTAFGLVAEWFLAYILFTRFFYVLGLAAIMQLFF SYFAVHFISNSWLMWLIINLVQMAPISAMVRMYIFFASFYYVWKSYVHVV DGCNSSTCMMCYKRNRATRVECTTIVNGVRRSFYVYANGGKGFCKLHNWN CVNCDTFCAGSTFISDEVARDLSLQFKRPINPTDQSSYIVDSVTVKNGSI HLYFDKAGQKTYERHSLSHFVNLDNLRANNTKGSLPINVIVFDGKSKCEE SSAKSASVYYSQLMCQPILLLDQALVSDVGDSAEVAVKMFDAYVNTFSST FNVPMEKLKTLVATAEAELAKNVSLDNVLSTFISAARQGFVDSDVETKDV VECLKLSHQSDIEVTGDSCNNYMLTYNKVENMTPRDLGACIDCSARHINA QVAKSHNIALIWNVKDFMSLSEQLRKQIRSAAKKNNLPFKLTCATTRQVV NVVTTKIALKGGKIVNNWLKQLIKVTLVFLFVAAIFYLITPVHVMSKHTD FSSEIIGYKAIDGGVTRDIASTDTCFANKHADFDTWFSQRGGSYTNDKAC PLIAAVITREVGFVVPGLPGTILRTTNGDFLHFLPRVFSAVGNICYTPSK LIEYTDFATSACVLAAECTIFKDASGKPVPYCYDTNVLEGSVAYESLRPD TRYVLMDGSIIQFPNTYLEGSVRVVTTFDSEYCRHGTCERSEAGVCVSTS GRWVLNNDYYRSLPGVFCGVDAVNLLTNMFTPLIQPIGALDISASIVAGG IVAIVVTCLAYYFMRFRRAFGEYSHVVAFNTLLFLMSFTVLCLTPVYSFL PGVYSVIYLYLTFYLTNDVSFLAHIQWMVMFTPLVPFWITIAYIICISTK HFYWFFSNYLKRRVVFNGVSFSTFEEAALCTFLLNKEMYLKLRSDVLLPL TQYNRYLALYNKYKYFSGAMDTTSYREAACCHLAKALNDFSNSGSDVLYQ PPQTSITSAVLQSGFRKMAFPSGKVEGCMVQVTCGTTTLNGLWLDDVVYC PRHVICTSEDMLNPNYEDLLIRKSNHNFLVQAGNVQLRVIGHSMQNCVLK LKVDTANPKTPKYKFVRIQPGQTFSVLACYNGSPSGVYQCAMRPNFTIKG SFLNGSCGSVGFNIDYDCVSFCYMHHMELPTGVHAGTDLEGNFYGPFVDR QTAQAAGTDTTITVNVLAWLYAAVINGDRWFLNRFTTTLNDFNLVAMKYN YEPLTQDHVDILGPLSAQTGIAVLDMCASLKELLQNGMNGRTILGSALLE DEFTPFDVVRQCSGVTFQSAVKRTIKGTHHWLLLTILTSLLVLVQSTQWS LFFFLYENAFLPFAMGIIAMSAFAMMFVKHKHAFLCLFLLPSLATVAYFN MVYMPVSWVMRIMTWLDMVDTSLSGFKLKDCVMYASAVVLLILMTARTVY DDGARRVWTLMNVLTLVYKVYYGNALDQAISMWALIISVTSNYSGVVTTV MFLARGIVFMCVEYCPIFFITGNTLQCIMLVYCFLGYFCTCYFGLFCLLN RYFRLTLGVYDYLVSTQEFRYMNSQGLLPPKNSIDAFKLNIKLLGVGGKP CIKVATVQSKMSDVKCTSVVLLSVLQQLRVESSSKLWAQCVQLHNDILLA KDTTEAFEKMVSLLSVLLSMQGAVDINKLCEEMLDNRATLQAIASEFSSL PSYAAFATAQEAYEQAVANGDSEVVLKKLKKSLNVAKSEFDRDAAMQRKL EKMADQAMTQMYKQARSEDKRAKVTSAMQTMLFTMLRKLDNDALNNIINN ARDGCVPLNIIPLTTAAKLMVVIPDYNTYKNTCDGTTFTYASALWEIQQV VDADSKIVQLSEISMDNSPNLAWPLIVTALRANSAVKLQNNELSPVALRQ MSCAAGTTQTACTDDNALAYYNTTKGGRFVLALLSDLQDLKWARFPKSDG TGTVYTELEPPCRFVTDTPKGPKVKYLYFIKGLNNLNRGMVLGSLAATVR LQAGNATEVPANSTVLSFCAFAVDAAKAYKDYLASGGQPITNCVKMLCTH TGTGQAITVTPEANMDQESFGGASCCLYCRCHIDHPNPKGFCDLKGKYVQ IPTTCANDPVGFTLKNTVCTVCGMWKGYGCSCDQLREPMLQSADAQSFLN GFAV
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix