POL1_ARMVN
RNA1 polyprotein
MWQISEGSQCCCTGKTWSNAEAKEARYVCNCILSCRLVKVEVVPQLPKSR
IAPAQDKAERITPLCNSNGGAAPTIPKSKRAFEPRTPLIKQRCDVVVRVG
PPADLDLVYPALVQEEVAIPPTEKVLQPTLKAEVRVPIFCAPKRMVAFPK
PPTKIASKRDALQFPAGAVAFNGINFIDAKGKVVLSEGAKRILKGIRVAK
QQRQRTARRSAACKKVRKARDLALFKRLSEECTFQDLPGGFAGEIPAGHA
CYRKVAAPTTSFKKEVSKGKKAKKPSTPVLPAQDFSCVDSFDWGEKSSPV
EIEDDWVLIEKPVLQRQAAHSAQGRATEALTRFAASGGFTVKAHQKVEEL
ASSGEAGHLIAGEFAELCLRSLVYNDAPVLSASIEELITEQDFKDAIELF
NIELAELPTDSTTCGQFNDWASAAKKMAKGVGSIVGDFARMSGAGVLITF
DRCIEYLQKKALTFCQKVFNATMAPYLSHLAEASNIISKIWKKLAEWMES
LKGKAGLALEVLAQHAIFALGAIVVGGVVVLVEKVLVACKVIPNCGIVLG
AFLTLFFASLGLTALECTAEEIFRMHQCCKGAIYSMYSVKEPMNEAEGSS
VTMGVLQGLDNAISALTRVGQSMISFKLGSFSYYAKIAQGFDQLARGKKA
IGELTGWLIDLVGGVYSKVSGQESTFFDELSTIVCLDVRSWLLKSKRVRL
QVETMAIGDRITLDTISKPTGMQGHKILITAAGVPRKTSADFTMCIKEEV
SKLEEVHQRTACAGINEGMRQFPFWVYIFGASQSGKTTIANSVIIPSLLE
EMNLPKTSVYSRPKTGGFWSGYARQACVKVDDFYAIEQTPSLASSMIDVV
NSEPYPLDMAYLHEKGMSMDSPLVVTTANTVKPPTNAGITDEASFFNRRA
AVIEVRRKDNTHFTPRAYDNCIEVRFLHNKCAYVDSEGIPQGPAVNTPME
EGWISPSEAVATLKNLLGEHVLAEEEKLLDYRERIGNDHPIYNAAQEFIG
NMHYPGQWLTTEQKNTYGINEEGFSFLAVDGKMYKYNVLGKLNPCETVPP
HPNVIPWLEEKTLSIVHWDAHKHIATGPRNALVSCFLQGLVQDQSRVQSV
DLMGKDSSPEQQAFFKRLTLSERIYLRLCQIRIDAVKKEQLSSVSRGALD
VLRDCMYKSKAKLVENYSLLLTLVAILVLIATAYSLISTLIGLAGCSSFA
GGMVALNHVSNASIPCSEPRLEEGYIPRNKFVSRISRTRGDGPAQGQGDH
EELVTELYYYFDGVKRLISCCWFKGRSLLLTRHQAMAIPIGNEIQVIYAD
GTERKLVWPGRQEDRSCKGYIEFPDNELVVFEHARLLTMPIKYEKFFVDD
PDHQISPNVAVKCCVARLEDGIPQFHFWNKYASARSDVHTIKDEGGSAVY
QNKIRRYIIYAHEAKRNDCGAIAVAEIQRTPKVLAMLVSGIGNVTYSSVI
PSYSSSFVRGDVPYVPEDGIKTNGYRKVGYLMAKDAPHVPSKTAFMKVPD
EICFPYPNPKQPAILSAEDERLIGTVHEGYTPIREGMKKFAEPMHLLDAQ
LLDEVAGDMVHTWFDAGEILEDVPLSIAINGDVEEEYFDPIAMDTSEGYP
EVLQRKNGEKGKARFFVGEPGAREFVPGCGPERAYLSLEEECKTRIPSLV
SIETPKDERLKRSKIETPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKRS
HLPCQVGINPYSREWTDLYHRLAEKSDVGYNCDYKGFDGLITEQILAVVA
TMINAGFRNPVSNQQRSNLLMAISGRLSICGSQVYETEAGIPSGCALTVV
INSIFNELLMRYCYKKIVPPIYRECFDRCVVLITYGDDNVFTVSQSIMTS
FTGDALKAEMANLGVTITDGKDKSLATIPARPLLELEFLKRGFKKGNGGL
IYAPLEKLSIMSSLVYIRSDGSDMLQKLVDNVNTALVELYLHQDREYSES
VRDFYLEKLPPGSYKELTTWYEAQIFHECQLSGESGWKPQGLIEVSHGAS
FASFVQQNGTELERHDICPGLAISGSKYIAREEEILMSLSSLLPGDINAV
KLTLKCGDGIGRLPSKASVLSQRKPGIVMQLCARAIKEKKTLVIRDERPY
IGGWAMACICGESFGFSIKDTLALYANLMGPNRKNGLATYFTDFDSPVHV
KKIHAITNGEEGVAMLKDSFAFCEPTTIAATSCDTRKEMVSHLPTSFPNI
VLIGGISYPKEGGEPGALYSPTDVVMSKKLQGVYVSEAVLKCCLRCPGAA
VKTVLQTSSPGSSLSQAHFRSLRRVQSHRCMRKS
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix