POL1_BAYMG
Genome polyprotein 1
MEQTLAQAVSRRGKTNTPMAEERKPFSPMNFSANFVAPELFYSANVRKIK
NIFRERSTTRFLDAISSDFELVAFLTLSPAHLMQLETTLRQEIRSCVVPI
VTSDASFETVAVIKTALDGMRFHFGHTTLEKGWMSMMRHAESCLQESSSS
AVNDLQMQIKRVGSLLLSGKNRVESCELSVLNLTARRFRIEYGLNGTYFG
EHVAMLLDLKRYIYGTVPKEFCWAKTKKHSLFTTPKWIKRTPIDCFLFCL
RVIPILHRFGVAISLLYWSCVAALNFPAFMAFLFKRQFAKYLAHSFAKHS
IYFIFLTIIAILWSFRTFASQKPKIVLQARSTAEKEKKLMMILASVVGIT
YLFDYDIAEALGNCLHKISRLSSYLLDDHQGIASRMFGASYGLQAGDSAE
DAVTTIISDLLSVTFKIVDEDASQGTVEDASETTFHSWVGVNTLAGRNMS
RPLQYDVNKTYALTPQNVQLQARAMADANNCWSMVVGHTGSGKSTYLPVQ
YSNYLSTKSDRRQQILICEPTQAATENVCAGVAANLGRAVYGRHEGWSRM
GDHCIQVMTYGSALQCHAMDPSFISTFDAIFLDEAHDVKEHSLVFESICD
TFKSVRKFYVSATPRDGSVCPEAARKYPLHVETSVCDSYRKFIAAQGGGD
LLDISKHDTALVFLAGRPECIKAANAWNASVTGEKRAFPLSSDNFATDFS
MLTERLKTHKTIIFTTNIIETGVTLSVDCVVDFGHTMRPCLDLNQKSLRL
DRRRVTRNERQQRIGRAGRLKDGYAIVCGDVDRAVNVISPDVLYGAALLS
FKHNVPFYMNETFESSWLEGVTKAQADTMTIFKLPIFLTRDLINADGSVA
REFLDVLKKHQFTTSDIKQAPSVTAKHIFPTWASYFSLHQALHYGDDKDE
IPHELRYARVPFSVTTLSKFDWPALALACEKHRASMSNVFAGIEEPARVV
TLQTNPANIQASITHLTHMSKNYKTLIENNQHVRQSMMTNVMFKWFSSTR
ITKDLDRNLRRCTDNLSVVEATLSSLRQILAGNTQVHATPHMQSTLEDII
ELQASDTLTEESLANALGIFVPKCNLFLLLATKGFKLVYVVCILLLVNLV
YTGLRKWREHLKQKGSNEILTNTMPVSEGGEILAEVMKMEPKMRKNIKRD
MDAAVESKLCGFTFVFPDDDKIGLEGKGNKYRPREDARLMYSTREDATFD
AWNEKAKERRKKVTDKAEPELRRAYEKRPYFNFYDLQTDSNILEAIFYTT
EGDEFFRTADPNRDMNLVADKLRSFLDTKLVVGHHQRKLLEETANVVIKD
TKGTAHKMEISQHDPDFLKQNGSGKVGYPEHRGQFRQEGVAVTGDYDLEA
EFGTDTDEISFGASTGILLSQVGVDVATRVGRICIGTFNMNCYFYSDWIL
VPGHLQDRSGNVTIQFPDQTVQTTTDALNANGVKRFYGLDVIAIRRPAIL
RPRTKLVKAFAIEEPVIAQMVFVDAQGVRKFTQSDWARKEENSGRWSHKI
STVLGMCGCPVLDVGKNRLIGIHVATNYTKKRNEFQPFTQEVVDFINGPG
TKIPYCPWVFDRPACGYSSHNALFEKPTTLADVIHMQASDGLHNINNAIE
GFGSSLKGQLVSPPTESTRQRFDKLFGSGSFELIGQMNKGLIDKHVIVGE
NDDVYDFMREHPTFTWLKDFMNEYAPSVLSYSAYYKDLCKYNRAKHVLTY
NPEELHCATKGLIKMLEDAGLTQGSVRTPQQVVSDIQWNTSAGPSYQGKK
RDLCAHLSDDEVLHLAEVCRQQFLEGKSTGVWNGSLKAELRTIEKVEAEK
TRVFTASPITSLFAMKFYVDDFNKKFYATNLKAPHTVGINKFGRGWEKLH
DKLNRPGWLHGSGDGSRFDSSIDPFFFDVVKTIRKHFLPSEHHKAIDLIY
DEILNTTICLANGMVIRKNVGNNSGQPSTVVDNTLVLMTAFLYAYIHKTG
DRELALLNERFIFVCNGDDNKFAISPQFDEEFGHDFSPELVELGLTYEFD
DITSDICENPYMSLTMVKTPFGVGFSLPVERIIAIMQWSKKGGVLHSYLA
GISAIYESFNTPKLFKSIYAYLLWLTEEHEAEILAAMTQSSTALPIPSML
DVYRLHYGDDEIWLQAADPLTDAQKEAAHTAAADRARLDLADADRRRKVE
ADRVEAARVKKAADAVLKPVTLTATRMPTEDDGKLKTPSGARIPSSAADG
NWSVPATKQVNAGLTLKIPLNKLKSVPKSVMEHNNSVALESELKAWTDAV
RTSLGITTDEAWIDALIPFIGWCCNNGTSDKHAENQVMQIDSGKGAVTEM
SLSPFIVHARMNGGLRRIMRNYSDETVLLITNNKLVAHWSMKHGASANAK
YAFDFFVPRSWMNPQDIEVSKQARLAALGTGTYNTMLTSDTTNLRKTTNH
RVLDSDGHPELT
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix