POL1_BAYMJ
Genome polyprotein 1
MEQTLAQAVSRKSKTDTPMAEERKHFSPMNFSANFVAPELFYSANVRKIK
NIFRERSTTRFLDAISSDFELVAFLTLSPAHLMQLETVLRHEMRSCVVPI
VTSDASFETVAVIKTALDGMRFHFGYTTLEKGWISMMRHAESCLQESSSS
AVNDLQTQIKRVGSLLLSGKNRVEGCELSVLNLTARRFRIEYGLNGTYFG
EHVAMLRGLKRYIYGTVPKEFLWAKTKKHSLFTIPAWIKRTPIDCFLFCL
RVIPILHRCGVAVSLIYWSCAAALNFPAFMSFLFKRQFAKYLAHSFAKHS
IYFMFLTIVAILWSFRTFTSQKPKIVLQARSTAEKEKKLMMILASVVGIT
YLFDYDIAEALGNCLHKISRLSSYLLDDHQGIASRMFGASYGLQAGDSAE
DAVTTIISDLLSVTFKIVDEDASQGTVEDASETTFHSWVGVNTLAGRNMS
RPLQYSVNETYALTPQNVQLQARKMADANNCWSMVVGHTGSGKSTYLPVQ
YSNYLSTKSDRRQQILICEPTQAATENVCAGVAANLGRAVYGRHEGWSRM
GDHCIQVMTYGSALQCHAMDPSFISTFDAIFLDEAHDVKEHSLVFESICD
TFKSVRKFYVSATPRDGSVCPEAARKYPLHVETSVCDSYRKFIAAQGGGD
LLDISKHDTALVFLAGRPECIKAANAWNASVTGEKRAFSLSSDNFATDFS
MLTERLKTHKTIIFTTNIIETGVTLSVDCVVDFGHTMRPCLDLNQKALRL
DRRRVTRNERQQRIGRAGRLKDGYAIVCGDVDRAVNVISPDVLYGAALLS
FKHNVPFYMNETFESSWLEGITKAQADTMTIFKLPIFLTRDLINADGSVA
KEFLDVLKKHQFTTSDIKQAPSVTAKHIFPTWASYFSLHQALHYGDDKDE
VPHELRYARVPFSVTTLSKFDWPALALACEKHRASMSNVFAGIEEPARVV
TLQTNPANIQASITHLTHMSKNYKTLIENNQHVRQSMVTNVMYKWFSSTR
ITKDLDRNLRRCTDNLAVVEATLSSLRQILAGNTQVHATPHMQSTLEDII
GLQASDTLTEESLASALGIFVPKSNLFLLLATKGFKLVYVVCILLLVNLV
YLGLRKWREHLKQKGSNEILTNTMPVSEGGEILAEVMKMEPKMRKNIKKD
MDAAVESKLCGFTFVFPDDDKIGLEGKGNKYRPREDARLMYSTREDATLD
AWNEKAKERRKKVTDKSEPELRRAYEKRPYFNFYDLQTDSNILEAIFYTT
EGDEFFRTADPNKDMNLVADKLRSFLDTKLVVGHHQRQMLEETAKVVIKD
TKGTAHHMDISQHDPDHLKQNGSGKIGYPEHRGQFRQEGPAKTADYDLGV
EFGTDTDDITLEASTGILLSQVGVDVATRVGRIFIGTFNMNCYFYSDWIL
VPGHLQDRSGNVTIQFPDQTVQTTTDALNANGVKRFYGLDVIAIRRPAIL
RPRTKLVKAFAIEEPVIAQMVFVDAQGVRKFTQSVRARKEENSGRWSHKI
STVLGMCGCQFWTLERQIDGIHVATNYTKKRNEFQPFTQEVVDFINGPGT
KIPYCPWVFDRPACGYASHTALFEKPTTLTDIIHMQASDGLHNINNAIEG
FGSSLRGQLVSPPTESTRQRFDKLFGSGSFELIGQMNKGLIDKHVIVGEN
DDVHDFMREHPTFTWLKDFMNEYAPSVLSYSAYYKDLCKYNRAKHVLTYN
PEELHYATKGLIKMLEDAGLTQGSVRTPQQVISDIQWNTSAGPSYQGKKR
DLCAHLSDDEVLHLAEVCRQQFLEGKSTGVWNGSLKAELRTIEKVEAEKT
RVFTASPITSLFAMKFYVDDFNKKFYATNLKAPHTVGINKFGRGWEKLHD
KLNRPGWLHGSGDGSRFDSSIDPLFFDVVKTIRKHFLPSEHHKAIDLIYD
EILNTTICLANGMVIKKNVGTQRQPSTVVDNTLVLMTAFLYAYIHKTGDR
ELALLNERFIFVCNGDDNKFAISPQFDEEFGHDFSPELVELGLTYEFDDI
TSDICENPYMSLTMVKTPFGVGFSLPVERIIAIMQWSKKGGVLHSYLAGI
SAIYESFNTPKLFKSIYAYLLWLTEEHEAEILAAMTQSSTALPIPSMLDV
YRLHYGDDEIWLQAADPLTDAQKEDARIAAADGARFELADADRRRKVEAD
RVEAARVKKAADAALKPVNLTATRTPTEDDGKLKTPSGARIPSSAADGNW
SVPATKQVNAGLTLKIPLNKLKSVPKSVMEHNNSVALESELKAWTDAVRT
SLGITTDEAWIDALIPFIGWCCNNGTSDKHAENQVMQIDSGKGAVTEMSL
SPFIVHARMNGGLRRIMRNYSDETVLLITNNKLVAHWSMKHGASANAKYA
FDFFVPRSWMNPQDIEVSKQARLAALGTGTYNTMLTSDTTNLRKTTNHRV
LDSDGHPELT
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix