POL1_BBWV2
RNA1 polyprotein
MDFSTMQVVVGFLKTSMGLQSIRDIVQKAKVDEKDKTLLHIHLCFFHANE
MARDLNEGMDVSQIHSSAAIKYRAAIVTRHVKMNVETGGYDRKRMVEYNN
ETCVNWFSCEFKEEKEESQELPVDEDCVEEIVENFLENCGISDQNDQIST
TSNANYAFGQGLYEYATRVSDAIVAVISGSIKKGIDEFLDKVYAAMSQIF
AAWMPKIRAAFQWFENIKEVVKNWARTMHEKINCILVGMEDCLYMGAGLV
AATCIVTLLEKFMVVTKILPAPCGAATLFLTTAMATISAAYVCTKAVEKS
VMLTNVLHFVTTNCQIVLNALFNHDATKKELGANQNEGEAPTGVGQFGIS
TMLQDVANLMSTWSTNSVTEIGRTFGAISQIKNGILALRDMVYFVFEKLS
DLAHKVLGFESQVLADLTILLGENVADWLSECDCMVSYMLEFNSRNREIF
DRLSQLIEKGRLIRTGVLRTGHRGSSQVMALVTKALEKLIELHNSVVMSG
SNTTRKAPFMVFFTGASGTGKTSVVQRVAINWLQEEQLGTNEIYSRNGQD
PFWSGYKRHAVVTYDDFGAVPGTTSNEAEIINVISRNPYATVMAGLAEKG
MYFDSRLVLASRNFLAANPESGVHDSEAYERRRHAVIRVSLKPGVPYNAD
DPCANQTYTLLDSKTPFREIQTFETYAELWSYLYTSFKEHEVQEELYLKS
LPILDSDKKEALEGLVGLTVIATSFAPKAVMQYGMEKFPGHHFLVSDGEK
CYFWHGDGSVESASVEQMQLSKQDVAQLKQQGLSTAMMYKDLAKAFPTLN
SLAVLYAKNIVVKRWVGPDLEPTKTCEDVYMREQIGNLPKWQRAYLYVLS
KYLTTQSPRGWFMECLEETKKNLRATYLWEYKQWPLPLKLALGSLIAIMA
GGAIWYSLQSLWCMSGDASFVAGAATVFSVSSFAGQSDIPNRDNSERSFR
NRKVRARTWQGQSSCFGDSALWIAETCMATLTFSNVRTQVCLAPGRGFFG
VNHCLAAIPAGVMVKMDSSIGVTYFVWGKEKLLQFDGNEIALYMTSTLPK
TVDSLLGRIHFDVETLPKTFSAVFFSYKYDPMIQQMVPELGSVTCKVHNK
AYTLAHGEYRREIPQSLSYEASTVAGDCGSLILAEIEGKFKLVGMHVAFN
GREGSASFMPYHASLDQKVGQGDFMLKYQEWAEPKILGPGCRAMGLIDPE
HALAASGKTTFVETPEEWHLDYPCDKLPSVLARGDPRLAGTVHADYDPFA
SGMSKYAKEAGPFDAASLKQVCSGIVEIWEDASADFPMDEVDLDTAINGL
ENVEFFDALVLGTSEGFPYRLDRGPGDKGKSRYVSGESGSLKITDEGVLS
DIAWFEEVSKTQVPDLYCIECVKDERLPIRKVLHEPKSRLFTVLPMSYNI
VIRKKFLNFVRFFMKRRDVLTAQVGINPYSREWTRMANKLLSKGNNILCC
DYSRFDGFLPKCIMNEIGNMIARLMKTDEVSRTQIKNLMLACTSRYAMCN
RVLYRVENGIPSGFPLTVIVNSILNEILVKYAYWHCFEDNPSVQSNFDAH
VSMVVYGDDNLISVSDAISSRFDGNFLVSFMEGLGIKVTDGIDKTKVGIE
FRRLENCDFLKRSFKMSPDGTWRSPMSKESLWPQLHFVKAKKLEMAEAYI
NNCNNILRELWLHDVKEAEEFRNKVLRNLRWIGHEQLLNMQQLAVFHSEQ
MNGVSDFLSTCVTVDSIPLMDPLVPGMLPVKTSEIIPRVFVAAEKHFEGN
FNDFFTISITTSRKFEEDKGFVLLFPYGAGRGGLPTTQFMRENVIRKGCS
IQKKFRQAYEKGNNILFISQSSVVPSYVFAVMLLHSIGAISRLSSNKALT
QAMQTCKRLEYLPKEYEEFF
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix