POL1_BBWVS
RNA1 polyprotein
MDSETIDMCVKFLKISFGLQSLKNLVKELFGGSELEKLAYVHAAFFHANE
MAIHWNADLPWEEVMSSKRIKERFGYVKSHFLRNVVYNADASGQMIRYNT
TTCEQWFCCNFNLASYSASYNSLVPEEGGSMPINEEAEIKIGQSLLTCAQ
SVTKAIYAKLSTLTTRSIQGFLECLRDAICGAFSSWLPCIRGAFAWFGNI
IEVLKHWAGAAHEKLHNFLEGIEECLYMGLGLVASTCIVALIEKFLVTMS
VISGPCGRPTLFLTSAMAIISSTYLLSKAVEKSSAFTMLLGFVTQSCQTV
LGSLFGKSAKGSEEAQGQFGPSAMLESLATLVSSWSSSSVTEIGRTFGAI
SQIKNGIIALKDMALFVFSKLCEMASKVLGFESQILADLSIILGENVADW
LDECDCMLAYLLEFNSNARDIFDRLSQLIEKGKAIRMGILRTTHRGPSQV
LSLVTKALDKLTELHNSVIMSGANSTRKTPFMLFFTGKSGVGKTSVVQRM
AANWLQQEQLGSNEVYSRNGLDPFWSGYKRQAVVTYDDFGAVPGSVSNEA
EIINVVSSNPHSVMMADLKEKGMYFDSRLIIASSNFLAANPESGVHDSEA
YERRRHVVVQVSLKEDMAYDPGNPCANQRYTLLESKAPFAEKAVFESYEE
LWSHVYNAFKAHEEKEKLFLSSLPIPERSEKEALQALIGICVMTTSYAPK
AVIQYGIDHLVGYHYLISSAEHVYFWHEKGEVEIVPMHLMKLDKMDKATM
ASTSLKSALMCQDMAKNFPTLNPLAVLYAKNIVIRGWVDANLQASKKCED
SYMREQIESLPKWQRAYLHVLSGHIASNETRGWFLNCLEVTKSNSRSSYI
WEYKSWPMPLKLALGSFLAILAGSAIFCSLQSLWSISGNASFVAGAASIF
TIGSATAQSAPPNKDGSEYTYRNKKIKIRNWEGQGPCFGDSALWIAENCM
ATLVVMKDRVQVCMAPGRSFLGVNHFLRMIPNGVMVKLETGMTETYFVWE
KSKLKLFENSEIALYTSSNLPKAPDSLVDRFHFDLETLPKTFPAQFFTYK
FDKDMQQYVPELGELLCKKAERALCVVSGEYRRVISHHLTYRNPTVAGDC
GGLVLAIIEGKCKLVGLHVASDGEEGAASPVPWDPDFKVAQGQSDFLLSY
DEWAVPKVLGPGCKAVGIISPEHTVGSGGKTSFLETPIEWQLNRPCGKIP
SILVKGDVRLAGTENADYDPFAVGMTKYAKEAGPFEPNGLDRVCESIAET
WHDASDGFEFGPVDLEAALNGIENMEYFDALVLSTSEGYPYRLDRKPGEK
GKARYVEGEPGNLEITDERILADIHWFEEISKTQVPDLYCIECVKDERLP
VRKVIKEPKSRLFTVLPMSYNLAIRKKFLNFVRFIMKRRDVLPCQVGINP
YSRQWGKVADRLLEKGNSILCCDYSRFDGFLPKCIMVKIAEMFSNIVGET
GAEREQTKNLMLACCSRYAICGRVLYRVENGIPSGFPLTVIVNSILNEIL
IKYAYWKCFETESLIRDHFDTYVAMVVYGDDNLISVSEAISSKFNGNFLV
NFMCNLGIKVTDGVDKTKVGIEFRTIEDCDFLKRKFKENADGTWSGVMAE
EHLWPQLHFVKAKKVEMSEAYISNCNNILRELWLGSPEKAAAFRREVISK
LKWVEPQRLLTISQVALFHNEQMNGEHPFVEACHQLENLELMAPLEPGML
PIKTQEIMPGLFVASEKNFTGNFDDYFTISITTNRKFEDGKGFQIIFPYG
AGRGGLPSKAFMEQNVIRKGCAIQKAFKQGLEKGNKMLFISQSSVIPAYV
FAIMLYRSVDRLPRALSNKALTSALGICKKLSYLPKDFPDLF
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix