POL1_BRAV
RNA1 polyprotein
MVKIGSDTLAPKQLVLENKYIAACLSKPANFALSFLAQGASLKPSVVARA
AINGVIACDTTTFQLLAMDGTPLSFAAAAVVVRQFQLAHNRFVKIGLRQF
YKECTRRCNAFNLQKAARQSRERRAACKRILASLDADLPCSRSSRRAIVT
AHYAGVATAARKSALFRQMRADKRASRALAAAMQPLVLAPPTCARIPYVC
PLSSSVEESVSRRSLERCSKRVPREHASPRVASEMQPFADRPRLFSRVLL
LPLSEITRAFFSRVFVPGSAMYDCATDLAHVVLDWWSITPMAHYLAMLDN
FLGTPTEESVRQASTNLLEEVEAMRALCRDHRANGVFAWVTETAGTIGST
LKTAAVAPFHGAGVALKAVLTPCASATLAWGEKFFQTLKSKFFEFLKPYI
QHAIYASAEIEKYWAFIHGWATKMWNNVGVELQALGDAAWWAIGITMVCG
IVTLVEKLLVYLGALNAGGILCSLMLTGLLGAAGLLATGKFAEASSTLVG
AMRSLIFTLFGSWKPTEASDGLTCNANALDFPLKVLETVGTGLISAPLGT
LQYIGKYGQAMDQIRKGKDAIKEFVGFCMDRVADAWDYMTGRKDSFLREI
ASAAKVDIVYWIKQTQSVLLQAQTIAVTDIVLLDTVTHLLYKGQILQLTL
AKASRTTSLDYARIVSTLIGELTKIRATCARAGSFDGRRPEPFWCYIYGK
SHCGKSLFMEDVSRALLKENGHAPNDIYAKNARDSFWSGYLQHACVQVDD
LSACVTRPSLESEFLQLVGSKMYSLNMAAVEDKGMSFNSSIIVTTANVYT
APTSAEITDKDAYGNRRNVVVQCRAAPDVEFDPRNPSASCEARLVHRTDE
SPLGNGQWRNCSAVLEDIIHHAAIHRNKENLLMENYRERSDTQHPVFVGA
KSFIHRLAKEKNFAHIVCDDVLYYHDSYIDSTRVSEGTINIGMEDACIQS
VVQWSELVGGVKDLGLLYAFVHAFTEGPCHVDSVEALNSEATSCQRDFFQ
SLSLLERIYMRLVQKQLDRIRANPDFLFSVDIKTRILQSFRHGYDEMITH
GGKVLAIFAALLLVLLLYSSFFALYQTFVAGTSSALVSAGMITQLSANAG
SVCTSASNPSGAASYVSSNIPIHHRWRSNYSERSYALNSNLEDKYLLDLL
VWLQIPGDSIISCIRFKGRSLLLTKHQALAIPEGARVYCNYYGRGRAVQT
IPLSWSYKKVREFADTEAVLFLDAQLSTMPAGREHYFNVPVERLPSVFDM
NGVVMKQKRYMTDSDDSLAAFTPNQPVVNTWENSRAKLNCERQGINTFAY
GGNYRNELPRSISSNCNTSPEDCGAIMTMIFEGRRVVVGMHVASGKNPQG
RYMSTACLLPDYHEDLSLNSMLQYTPYDGICKEGYRQIGNIENIGARPYT
SGKTAFVAVPQHLLYSPPVLQEKLPGSAQPVTIQVEVKQPAILSKDDPRI
PEGTSYDPLIDGMAKFSHPMAVLDENVCNEVAQDIVESWHDCFQDLQDVS
DEIAINGSTEMDYEPFNLQSSEGYPYVTQRKPGESGKIRFFEMDPYTGLK
SLIPNTLPAMRYEALQRDCFTSVPEMVCIETPKDECLPLRKICIKPKTRL
FSILPLEFNLLLRKKFLHFSSSLQMHRDTLPTQVGVNPYSREWGELLQRL
RAQSSVAINCDYASFDGLLTGQILEKIGTMINKMYIGSEASKIQRLNLLM
SIVNRKSICGARVYEVRAGIPSGCALTVLLNSIFNEFLIRFVWRTTIIGV
PRERFSQYVTLLIYGDDNLIAVHPDYLPHFNGEIIRTRLADVNVIITDGS
DKTAEKIEEKPLVQLDFLKRRFRKLNDGTVYAPLDLASVYTSLQNVTMGA
GSIHIALQNNVHNALLELYLHGNETWFNHLRDFYRKSHAWVNLPSWREAF
AFHQGQISGVTPWTPYQMFDVPVDGGRLRAMMANQGEAAFSTHLGREIYI
CGPKWCVSDPEHQFVVSTTPLRSADRGSGIHRAIEYPCNGVGRLPSQDWV
TKFKSSAHRVTAEIRKAHASGKAIYFRDDPPYVANWCAAIGFAQGLGYDY
KSMINLYHDVSVPGSDALYFYFEQRARRALPEPYIPPHLRTRVR
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix