POL1_CNSV
RNA1 polyprotein
MGWICPNVSCLGHTSVLSNKEISREGRCERAMCGSLLVKVAVPQQPAKKK
KQATPAPRPTYPPCVVEKTAATPVTVEKVFVEVIPTVPSCLAPKWMLGIQ
RVEGAPSKAPKQAVPKWVWQMRQLLKAALTGANSFGPRYVRAHFSRARIS
WIYAQLCEGCPLPLWNRGRALKKSSLALLARIEDTKQQKRAAWEKKEAAP
LKSKREYEQKRALLIPLIEKLRARLLQDEARELREQLFPSGNGGTDTTKV
AAASKAEIKAAAQLKAYQDVCAKVWRVKRQEKKAQQAKLVEDLITSANCG
KQDVSEPAIEKAARPKRRIEIGDFVPQKTLWGLYPCVGLGANMADPVCRV
LSACVSIAGKRPDLVSTIYAFITGEAQVWLSAPRVCMLAKRIIELSDWYP
HELLAEELKKISDEENCKEAEREINLKYLEISKATENMRANGLFNKLKGK
AQDLWSGIVDFASHPFRKYLATAAEFVEGFSHRVVDAVMSRVNAAIAQFA
AQLDIAKTLVDQLVIHVKRWYTSLCTSFDDSLKLLGKWAGYALGLIVGVG
VCHLVEVICAHMGLPLGGVITGVFTTAYMGWLFVKTPVGSELVMNLRMQV
ARIARNIFDVQRTGIPPDLPANPNVGFSVPYEAFGGIDNQPFSMGADVPN
ARAIPVVSPIINAMAGFGASMLSMKAMGLIEMGKLGAACHSLRMGKDALC
EFVSTVLYYFGRLADKVTGRETEFFDELSILVQIDVKDWITRSRGVLLDS
CYTSLNNMICSDVVNKLVTDGEQIASNIAGTPRRLSLDFGQLVSSIMKDL
LDLQQRIVRHGVTVGRRKEPTWIYIFGPSHCGKSNMMDHLTSEVCRYFDL
PYTYIARNGQDNFFTTGYKRQTVLQIDDLSCVENVPPIERELINLVSCSE
YPLKMADLSDKSISFQSPFIISTSNQRTCLPTCGITHCEAFNNRRAVVVE
MRRKPGVVFDPMDCHAAMQGRFLDKRDHTPLFGVQGQPETFWKDVPEMTT
ILLNICVAHRQEQDILQEQHIRKHAVNDPLILASERFLKQESRKALCYMP
RVEMEICGVQSQAAGCYYLCVDQKLYTCEDDGNLVETPCLNPSYAQWERN
SSENFVGGVQALDALECRSILVSGILRNLVQGQCCVLSIDEMSRLPLCTQ
RLFKALQLQERVYLRLIQKKISHILSVDESNVYSKNAWMRCLEFAAASRD
YLKEHGLEVLLLLAAMMILCVALYYFVGAFIGVMGGALSMGAAMAGLKEV
DMKAQYSSGAQEGRYRSRNIPIRQRYRYARGELDEEVPLGGQLAVALYGS
QGRFISALQYKGKSVMLTRHQMLMFAEKERVTCIYLATGESVVLTFNRDD
VQEFPNHETCMWQAAGMLQLPAKFKDCFLEKGETELAPAFELEGYVLRPD
STAFIMTILKTWARVQYEPFVVRGSLAKEKYVNELPTSIWFQYQSRNNDC
GMVCLAQVGGKKKIVGLLVAGVDQQTWADNLPNPCMAEMKSQIEYEFKLG
AHTEGYTKLGYLTKDKTPHLPKKNNAVLVKPEYRIDSPVPIKEPSIISAE
DPRCPKDAEGKPIDPIVKAFEKKFTTPMDLLEDDILESIAQEMVDEWQDC
ESEPLCDVPLEVAINGIPGTQIDDDDEFEDAVECLKMRTSPGYPYVLHKE
PGMKGKEAYFELAPDGTRALKEGSLAAELYENIVQYSKSAIPELVVIECP
KDELLKTEKVNKACRPFEIMPLHYNLFLREKTLAFSLFQQRNRHKLACQV
GTKAYSHDWTHMYQRLVAKSDRAINCDYSSFDGLLNSQVVSCIANMINSM
YHSPEETVVSKRQRYNMINALFGRLAITGQEVMRVRAGLPSGFALTVVIN
SVFNEILMRYCFKVLVLGPQRNSFSTYVTLLVYGDDNLMSCTDKIAIYFN
GETIKETLKKKNVTITDGSDKTAPDIKWKTLGELDFLKRRFLKLETGVVQ
APLDLTAIFSCLHWVTPHPQKMPKGGAQLQVENVDTLYELALNVQVALTE
LYLHGNKEEFQRVRNFYTKKMNILPAGYYTWADREAFHMSKQTGMEAYQP
AKEIDLDVGQEFARFMHTSDIGNQVHFTRQCLVVAGPFYKPTPDQLLVST
TPLKQGESGYWVPVETGMGIGNLPTIAWVHRFMRPTQLVDAYGYKIWGNV
RSHIESGKSLVFRSEAPYVAGNAALMAFGQAAKLLEIKTALNLYRNVIPE
STYGLEQYFDAAIPQASLPGTFYLANAESESLLQEHKTGTVIGLTTEKFN
LNGARDLIMQGQKLGKLPVMAATQAPNKFYVGLCCQKNFCPGHATSSDSI
AKAFSQCWAMRCAPNSSSRKVTFEPEWRKNKFLGIS
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix