POL1_CPMVS
RNA1 polyprotein
MGLPEYEADSEALLSQLTIEFTPGMTVSSLLAQVTTNDFHSAIEFFAAEK
AVDIEGVHYNAYMQQIRKNPSLLRISVVAYAFHVSDMVAETMSYDVYEFL
YKHYALFISNLVTRTLRFKELLLFCKQQFLEKMQASIVWAPELEQYLQVE
GDAVAQGVSQLLYKMVTWVPTFVRGAVDWSVDAILVSFRKHFEKMVQEYV
PMAHRVCSWLSQLWDKIVQWISQASETMGWFLDGCRDLMTWGIATLATCS
ALSLVEKLLVAMGFLVEPFGLSGIFLRTGVVAAACYNYGTNSKGFAEMMA
LLSLAANCVSTVIVGGFFPGEKDNAQSSPVILLEGLAGQMQNFCETTLVS
VGKTCTAVNAISTCCGNLKALAGRILGMLRDFIWKTLGFETRFLADASLL
FGEDVDGWLKAISDLRDQFIAKSYCSQDEMMQILVLLEKGRQMRKSGLSK
GGISPAIINLILKGINDLEQLNRSCSVQGVRGVRKMPFTIFFQGKSRTGK
SLLMSQVTKDFQDHYGLGGETVYSRNPCDQYWSGYRRQPFVLMDDFAAVV
TEPSAEAQMINLISSAPYPLNMAGLEEKGICFDSQFVFVSTNFLEVSPEA
KVRDDEAFKNRRHVIVQVSNDPAKAYDAANFASNQIYTILAWKDGRYNTV
CVIEDYDELVAYLLTRSQQHAEEQEKNLANMMKSATFESHFKSLVEVLEL
GSMISAGFDIIRPEKLPSEAKEKRVLYSIPYNGEYCNALIDDNYNVTCWF
GECVGNPEQLSKYSEKMLLGAYEFLLCSESLNVVIQAHLKEMVCPHHYDK
ELNFIGKIGETYYHNQMVSNIGSMQKWHRAILFGIGVLLGKEKEKTWYQV
QVANVKQALYDMYTKEIRDWPMPIKVTCGIVLAAIGGSAFWKVFQQLVGS
GNGPVLMGVAAGAFSAEPQSRKPNRFDMQQYRYNNVPLKRRVWADAQMSL
DQSSVAIMSKCRANLVFGGTNLQIVMVPGRRFLACKHFFTHIKTKLRVEI
VMDGRRYYHQFDPANIYDIPDSELVLYSHPSLEDVSHSCWDLFCWDPDKE
LPSVFGADFLSCKYNKFGGFYEAQYADIKVRTKKECLTIQSGNYVNKVSR
YLEYEAPTIPEDCGSLVIAHIGGKHKIVGVHVAGIQGKIGCASLLPPLEP
IAQAQGAEEYFDFLPAEENVSSGVAMVAGLKQGVYIPLPTKTALVETPSE
WHLDTPCDKVPSILVPTDPRIPAQHEGYDPAKSGVSKYSQPMSALDPELL
GEVANDVLELWHDCAVDWDDFGEVSLEEALNGCEGVEYMERIPLATSEGF
PHILSRNGKEKGKRRFVQGDDCVVSLIPGTTVAKAYEELEASAHRFVPAL
VGIECPKDEKLPMRKVFDKPKTRCFTILPMEYNLVVRRKFLNFVRFIMAN
RHRLSCQVGINPYSMEWSRLAARMKEKGNDVLCCDYSSFDGLLSKQVMDV
IASMINELCGGEDQLKNARRNLLMACCSRLAICKNTVWRVECGIPSGFPM
TVIVNSIFNEILIRYHYKKLMREQQAPELMVQSFDKLIGLVTYGDDNLIS
VNAVVTPYFDGKKLKQSLAQGGVTITDGKDKTSLELPFRRLEECDFLKRT
FVQRSSTIWDAPEDKASLWSQLHYVNCNNCEKEVAYLTNVVNVLRELYMH
SPREATEFRRKVLKKVSWITSGDLPTLAQLQEFYEYQRQQGGADNNDTCD
LLTSVDLLGPPLSFEKEAMHGCKVSEEIVTKNLAYYDFKRKGEDEVVFLF
NTLYPQSSLPDGCHSVTWSQGSGRGGLPTQSWMSYNISRKDSNINKIIRT
AVSSKKRVIFCARDNMVPVNIVALLCAVRNKLMPTAVSNATLVKVMENAK
AFKFLPEEFNFAFSDV
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix