POL1_CRLVP
RNA1 polyprotein
MGIFTLCSCGVPCPTRSFYRRHMASGCDLLPTRQQLADVGYTEPTVIAEV
VTPPTQAPLELFVEISPPVLAPFEPSVEISLPIQAPAEPIVEASPPAATQ
FVGIEALIASGPCFFGSFGPFEEYYSSPVGPLTRFDTLRREGHCAARARV
AAVAAKAVIVQQTLSETAAAMRATLPLWMKGQVAPPVKSKRALKREAKAK
AKADYLASDEAYYKATDGLTALPPGVSRDVHMRQLDAMEVAYLAHVGDVA
ARGFQRRQVLRAAYKARCEKRAFKRFLEEVDFLCLPVHIVDKIQTPFDGE
QAAAPEMQKGMVYATSRRQVKTRRSFSSFLPKEDFSFTLGVCPARSPTVT
PSSTPSTSRSSSPEPRVSSPSGVLPEKAACIGFCSHGSECTEHFCFGYLN
LKSEALASQYLAWLLQTKLPGGISCFELEVSSYLEQCQDTMEAIDLWWHA
MDRYCFNFKSSKYVILDNFLCKHSIAKDQTPREFLAKHRIAKAKALHRVP
SRKEKMQALCEQRADKAWDAYIELNKNCKVGEGPLEYLKAAKDRCVEFFS
PFTKYCNEAIRSLNPLVAILGPFKDGFWTCFNNLREKCLKMVNDHWLAFA
AGTTLVLSLIFLLCIICLVKIFSILIANLGLGVVAITTLVTALVVGFFLF
NGMLEQAADLQLCSLVASDFLNFLAQNQGSALVAGTMASVQDDLRGQGVS
WCFSALYKLISRVVPVGIKETSILFNSIGNVSRSANHSKDFFLNMKEMAC
SWMDALSDAMALISDDSVSAMQVLKHLCEHDFLDWAKKVERYAGETYDSL
IISPAERLKILRILADQQESFQKAFYNPRIASKAPRLMLTEFNRLSTLLR
DAHNALSRASLFDRQRTPPFWVHLYSENGGTGKSMAMMPLGNHMLDAIGE
PKTCRFVTRNVASKFLNGYQHQPCFLMDEFGAAPKQDYSDEVTMLDLVSP
NALTLNMAAIGEKNTMFTSKLIISTANRRLAHPDVKLGANLDGFLRRRNI
LAEVVLVSGKPHFHEFNLLAPRTEQKVYLNRAMQESQVPDPLTPQEFYSL
CTENFVNFLNQQSSTVAMSAGLNYVRSSDFSHLKDFLLFKIGLDFEENEV
ERIVTDYGNSLKNETIFPPEHEQIFQKWKDALDSLTLPELVSLLDKSVSE
TFVYTLISENHPNVVMSSLTPYECMIYAICKKKYREGTEAKLPFPEGETT
SYGASFLSFVAQVALCIPKWALFCVALCAVLLVGYLIIKFAIFLFSGVVT
LLGALAFSNLSGDGAEDSPSFDTNRKRGGVKFEYSTKWDASSTNRFAESY
SENGTIPAGTSWADFFGEGPEEEPSQSLLNLLKHQVVLIAEPTKVVYNCI
ALGGRNFLITKHVWDLMPACNYGLYGYAVAKDRIFISPRIRPCAQLKGRD
LVIVQLPDSVPPFTSLPRDIFLENMAKAPKTANACLVVAKPLFERRSVAK
LEQTIYPFKQLPQVHSKDTYSCGSLGSKQMPACYSYVFETYAGLCTSPLI
AQEGGRCIILGLHVVGDRSKMGYAQIVTLDDFSDVALSDKVGQGPEEMYI
PTKNSECFGSVTKLGAWTGPKPYFLEKTSLIPSLISTSIDVERTTEPAIL
SQRDKRLKDSINPEFDVFLEGMKKYAVEAHSLDEDLEVFEDALDRVFLEI
PEHACEDLTNDQVCNGIEDDPYAEGIVMQTAEGFPFCTQRPAGASGKSWL
FAGAPGDWHIVPGSLLANEMHKKEVAPSRGLFEPLIGIDFPKDEKVDSSK
VYIKPKTRLFTILPVDYNILVRKYFLSSVSHIMTQHNTIPVKVGIDCLSN
EWSILYHQLRSKGTNWFNGDYSRFDGITPRNVLQGIVKRINKFYNNKNSL
AITDSNLSINSDLARSLLTDMASTRYGLTNGDLWYVTSGIPSGFPLTVIV
NSLVNNFFIHFSYIKLMKREELNSLYPLHSFRQMVAYATYGDDNLVSVND
VITEKFNLVKIADLLAEHGVTLKNGADKNEEILSPFYPLEKVDFLKRKFV
HYQGHVVAPLNPVNITERLHWIRKGLGEADATLENCSSAAFEALFHGRCY
YDTLVAKIYKACAASKLSIQLPTYNDALAIFLSNDSFAKAIQTISLDLPK
AIFVNKSNYFVSEIFPDVFFCSNERNVTLHKLLEITTTRNICYISRNYES
RNSSRGLFSLKGEGWALAPVSARLVVYKNMQKPVYFVDEANDGLALAYCL
DYMLRIKGVSRSRLAQVLYNIFGHDETLCSRIASNFSLLDSNKYMPPHKK
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix