POL1_GFLV
RNA1 polyprotein
MWQVPEGSQCCCTGKSFSNAEAKELRYVCSCWMSTRLVKAEAPPQQSRKS
GIAPTPLKSKGTIQVSLPKATGVKPSIHKSKGASVAPAPLLKQRCEVVVQ
YGPPADIELVYPPLVREEEKSSNIVVLPPTQKVEVRVPVCCAPKWMVAIP
KPPVKLAPKASKLRFPKGAVAYNGVNFIDTKGKVVLSEGAKRILRGIRVA
AKQRLRAARRSAACKKVRAKRALAEFEAIVQSERLDQLKTGFQVVLPAPK
MSCSLKEAAPSTTSVVVVKKRKLPRLPKILPEQDFSCLEGFDWGEKSHPV
EVDIEDDWILVEKPVLKRQAVQTAQGRATEALTRFAATSGFSLGAHQKVE
DFASSGEAEYLMAGEFADLCLLSLVYNDAPTLSATIEELRDSKDFLEAIE
LLKLELAEIPTDSTTCAPFKQWASAAKQMAKGVGTMVGDFTRAAGAAVVI
SFDMAVEFLQDKALKFCKRIFDVTMAPYLQHLASAHSILKKIWEKLSEWM
ESLKSKASLALEVMRQHAIFALGAMVIGGVVVLVEKVLIAAKIIPNCGII
LGAFLTLFFASLGLTALECTAEEIFRMHACCKSAIYSMYSVAEPTMADEG
ESHTMGATQGLDNAIQALTRVGQSMISFKLGSFSYYAKIAQGFDQLARGK
RAIGELTSWLIDLVGSIYSQVSGQESTFFDELSTIVCLDVRAWLLKSKRV
RLQVETMAIGDRITLDTIAKLLEEGHKILVTAAGVPRKTSADFTMCIKEE
VSKLEEVHARTACAGINEGMRAFPFWVYIFGASQSGKTTIANSIIIPALL
EEMNLPKSSVYSRPKTGGFWSGYARQACVKVDDFYAIEQTPSLASSMIDV
VNSEPYPLDMAYIHEKGMSMDSPLVVTTANTAVPPTNSQVVDLPSFYNRR
AAVLEVRRKDGSFFTPRAYDSCIEVRFMHNKCPYVDSAGVPQGPAVNTPM
DEGWITPSEAVAVLKNLLGEHILAEEAKLLEYRERIGNDHPIYNAAKEFI
GNMHYPGQWLTAEQKSTYGIKDDGFSFLAVDGKIYKYNVLGKLNPCESEP
PHPNVIPWLEKKTLEIVHWDVHKHIATGPRNALVACFLQGLVQGQSKVES
VERMGKDSSPEQQNFFKRLSLSERIYLRLCQIRIDNIQKEELAGSGRGPM
AILRECLMKSKQVVVENYSLLLTLVAILLLISAAYTLLSTVVALAGCSSF
AGGMVAVTAVNNASIPCSEPRLEERYSPRNRFVSRISKIRGEGPSKGQGE
HEELVTELYYYCDGVKKLISTCWFKGRSLLMTRHQALAVPIGNEIEVIYA
DGTTKKLVWPGRQEDGNCKGFVEFPENELVVFEHPHLLTLPIKYEKYFVD
DADRQISPNVAVKCCVARLEDGIPQFHFWSKYATARSEVHTLKDEGGGNV
YQNKIRRYIVYAHEAKKYDCGALAVAVIQGIPKVIAMLVSGNRGVTYSSV
IPNYSSSFIRGEVPYVPEDGLVSRGYRKVGYLHASDAPHVPSKTSFMKVP
DELCFPYPDPKQPAILSAEDERLKGTIHEGYTPLRDGMKKFAEPMYLLEE
KLLDEVAGDMVQTWYDPGEFLEDISLDQAINGDMDEEYFDPLVMDTSEGY
PDVLDRKPGEKGKARFFVGEPGNRAFVAGCNPEKAYYQLEEDSKTKIPSL
VSIETPKDERLKRSKIDTPGTRLFSVLPLAYNLLLRVKFLSFSRLLMKKR
GHLPCQVGINPYSREWTDLYHRLGELSDVGYNCDYKAFDGLITEQILSTI
ADMINAGYRDPVGNRQRKNLLLAICGRLSICGNQVYATEAGIPSGCALTV
VLNSIFKELLMRYCFKKIVPPVYKECFDRCVVLITYGDDNVFTVAQSVMQ
YFTGDALKMQMAKLGVTITDGKDKSLSTIPARPLLELEFLKRGFVRSSGG
MINAPLEKLSIMSSLVYIRSDGSDMLQKLLDNVNTALVELYLHGDRTYFE
SVRAFYFEKLPPGAYKELTTWFQAESFHECQKSGESGYKPQGLIEISHGA
AFASFTQQAGTELEKHDICPGLSIAGTKYIATENEIVLSLSSVLPGDRNV
FKLDLPCGDGIGRLPSKCSILNLRKPGLVMRLCKRAQDEKKTLVIRDERP
YIGAWAVACICGESFGFGQQSVLALYANLLGPNQRNGLASYFSDFESPIH
IKKVHAKTNSYEGGEALKEIFTFCETIFYEATEMDTRKVMLQNQPDVYPS
ISLVGGVCFPNEGGEPGAMYSETDVTMAREVQGVYVSEACVKCCRRCVGV
ATRVVTDTQLFGNNLLKTHLKALRKIQNHTCLRK
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix