POL1_RRVC
RNA1 polyprotein
MGWTCPVQGCMYSRSTWSNRGLKEDGLSSTMRCPGAMCGAMLVRSEPVQA
PKATVVPQTPVTAVRPKRTVVSATPLRKQDCVVVVEVGFPALLSLEYPAL
AGRARHTGEFDSALLARKPSNGGTARAPTGWFKPRVVRTQPAKKALPSWV
SEARRLIKGALEGSNAFGPRYCREKFPKARLVWVLGMLSKSSPPSVAIGR
QLKKSFLALQARIARALAKKQSARAARRQEACRKIRLALQQARGIAALER
QQARQLSGAGLYSVRLCTKRALSPIVEVPKRHKKKAISLPSPVSVQEFPE
GLVGPNFWETSGLLNCVASPQRREDLVFPVYGIDSCRTDPEYFVVGPKSP
SKIMGDTKPRLPTCPAEALNLLWASNLFEDWELDIIGQMVSDGLLTSQAF
LDGCTLVSYYGQEQMVDSFHCLLQDPVPAEVAEALAVDVQALDFDAVFGC
GISDFLRGTRDAMKGWIMDPVIAKSTTWCNTIIDKVRALFDQYFAPFHKI
IDGMSYVNSLWAKCKEWAQSVLKNGSQLFSVMWETHCVSFVIIITCACTL
LVENVLKELRLISRVGTLTSCVISGALGILGCGYILAKCEDLAVVSASIR
AFLGVLLCPPTMEAVDLNQSLIPEEIQATSWTGVDRVLGALNAVGSGLTG
FNTDTIIYWGRFAQSFDGMRRGKDAVCALAACLFEKLGTVYNRVTGKEAA
FFHELSSLVSIDVQGWLNSSRRVMAESIAFAKSDAVAFATVERLINDGET
IQLTAASAPKSHSMQFGQILAERLRELRTLRNDMAHAGSFEGRRCVPFWL
YIYGPPGVGKTTTMHEFSQALLTAFEFPSDSLTSKSATDKYWSLYRRQAL
VQIDDLGAISESGMEQEMMNIVSSATYNPTMAVANEKTTLFDSKFIVSTS
NNYSAGTDAKIHDRKAFNRRRRVVIKTRGKAGVAFNPHDSTAAAEFCVVE
RDDRAETPIWVQSGEAPDDKELYWMDFRTTVAYVIEQARIHHNAEDIEQA
QYSMKHSRTRQLYQVCENYIGEVKMSVANFVPGDMLGAWNLEPKGRFFYS
CVDGRVYSYDPEQKAHDEGPVDKALDFEQICLEKLSYTLQADIQGGPKSA
TAGIFLRSMVSGECAVESVDKLNRSASREHLIFFKNLSLADRVYLRLVQK
RILQLAMVGDPLGLRSYTVMMEGFQNSYNYVKENGGRLLLILCSCMLLGI
ACYTFFNALAILIGGTSVAAGAAAMVDIGACGSTSTYASEYGAKMGRRNM
PHRSREIPAVWSEETGHDEKWQLCGLLETCRSDMPAVHVNLVPGNKFAIT
KHQAQAIPDGSSVGLSVAGRSFRTFQWRASALTEYAESEICTYFDSRIPS
LGKQAMKMYSDSDLDALNVKYFSTRTLHFRLVDDQVEKRHWDADACVIST
PKTIVSTINGVIYRQEIPTAITYRRESVKHDCGALVFTEVRGKPKAVGML
VGTLGGTTYVCKFPHIEVDAFACVPDIRGFNLEAGVSTLGYSKLGWLDRR
HQPHNSEKTEFVPIPEKYHMDDVPCKIPAVLSAKDPRLADIPQCMGYDPY
KQGMEKFAHPMQEIDEQLLATVCDEIAQEFHDVGVRGRMVSMDEAINGHH
KYEIPSFYVEGASTRELNELRTSCSAEVWCCDPRSDIEFEYPRIIPGPVE
SKWKCESTCCGCTFKSGGTEAIISFVKARSPCCEEIFFDGLDLTTSEGYP
LFLDRPAGAKGKERFFEGSENQKFLIPDCPLDVQLKKGIEETHLGTPQLI
IKESAKDELLKEGKVLPSEGMPGTRLFSICPAWYNIVVRQHFVYIAESVR
KRRRTLSSQVGIVVGSREWDDLAARLRSKKNDKMYCCDYSKFDGLMTPQI
VHAITNIYERMFSGNDGMSQFRQNLLMGICNRISICGSQVYRVEAGMPSG
FALTVDFNSIFNEILVRCAYRSLVPEIERPFFSNNVVLIVYGDDNVLGIH
PNIESAFNGNAIKAYMKEELGIKITDGADKLSPVICARPLEQCEFLKRTW
RKDRQYGLYRAPLVETSIYSCLRYVRLQNYDWQAPLLQNVQGSLYEASLH
GPDMHARIYKHFATHFPKWVEEHELYTYEQCRTRFIAAKNGDFNFHPASA
QMGHVFSQQTEIQELSQSQNPKRCFQLHPKIHICGPGHNEQDCFYVDVRV
KGKITKGKGFHHAPVFSAGSGQLGTVKWASSFRSSSACPMRDLAVDAFKR
GECVYFRDNGELINAWLAAINFGMSINADGLDGLLQVYRNQGPTHLDDLS
FYFEGGVVGVPAPAHLMVYGTDTSILNRLCPKTVLESAPPPGRSSNVSER
SQVQTFLHMSPKPCFITLKGSGKVCHGLRCNNSCRGHISCTDVVRNSAAN
QRAAMLDVLRRGCYNIQ
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix