POL1_TBRVM
RNA1 polyprotein
MSVTLSPPGDCFTFNHVKYNNSLNKYLFYNNNLDIVLDDFDFYFNFYAKK
YNVLSSFFSDRVLSALYTPMSVSEAASLALEDFCELALDKLKINPFHQLW
EETLANWPVYPGTSLLDFFRTQYEIRREVAEASAEALRLKKATRADAFAD
EVKFLIKNGVLPHLAGDFARKIWSTGKDQKKTRTAFLVKIKKANQLKQQW
NSARSLAAARAEVLREFEPSPQQIQKAIEAQLFAEKLGRKYATLTARVRA
KRAAARELREKQLYQETVDLLNASLLPPMEKVEIERKYRKVRPTGANVVH
QVVANPLGSLCPYMGLGAKTADVRCQATLMAGKIHAQYPRLATAIYAWVI
GPAAHFECITPVRNFVKGLTFMVDFFPEEALIHELNEITTEAVCIGASMV
LDEERAKLEAHAQSANCRANVFMKAMAGVKNMAKCAYTGFKTGCEEAGRS
LAEGICSVMMRSFRECIAQIKTELGCAIEMVEVMIKKVKDWFYSMLEKLQ
CGLETLGSYAMYALAILLGCGLTSLLERCIGGQGILTKLFITGVLAAIGL
QAAGGFDNLQREMVQLCTALAAGIFDIQHAGNGKYKPSWDITAEHAREDA
RDSNVRSIPIISGVIEALAQFGTGLCSMQSATLIEIGKIGAACHSMRMGK
EALKEFCATLMYYLGRIADKVTGRETIFFDELSTLVHVDVRGWIKRAQSC
MRESFHTEIGNQFFRDMVAQLVDEGQKLQIGVNGIPRKISADYSQLIGQI
MKDLVELHKRTIRAGISEGRRCEPVWIYLFGQRHCGKSNFMSTLDNALAK
HFNLPNTTAYRNCKDAFYSGYSGQTFFHMDDLSSVKLEPPLEAELINLVS
CQEVPLNMADLADKPIYFRSPFIISSSNFEDVPAGCGVRDIEAYRARKAC
LVEMRRKPGVIYDPENPLLASQARFKDPMYQTLINGQTEETSWMEMDDVV
TEIINISARHRSAQEKLQARYMREKALLDPLALASESFLVKEAQKVFLDF
DGVELEKAGVPRPEGGHGLYVDGVLYLVNASFEFDEIPIKDGGYQRLWDS
RMRKKFLPAIQRDEHLNTKSMVVTGFLRSLVNGECAVLSKDTLTASATTA
QLSIFKALRLEERVYLRTLQHQLDLYSQDIPENPYCNSAWVKVLGAIGAG
RDYLVQNGCGILMIAAALILILVSGWGFWKLFVGLFSGTMSLGAAITGMS
AVDIKAQQSSASQEKGYRARNIPIHHRYAYARSQAGDGLLPAARLCVAIY
QPGGGFVSAMQYKNKSVRMTRHQALRFKEGEQLTVIFASTGESQLIRWHK
YHMREEHGSEIVTWLAPSLPALSPDLKDLFLEDKEVDLPNHFKTIGYVLR
VDSTAFHYDTLDTYGAVDKTPLPLKGVVGNELYLHEIPEKIVFHYESRND
DCGMIMLCQIRGKMRVVGMLVAGKDKTSWADIMPPNSLAELKSQIDYIPE
FGEACDGYFKAGYVHKSEAPTLPKKTNMVPVPESLRVPCDVPVKEPAVLT
KDDPRCPIGVDPPRAALKKKFTQPMMELEQEILDEVATDILETWYDCEDH
VLSDISLSVAINGIPADSEEAELENFVMKTSPGYPYFKNNRAEKLKGKHA
YFEEAEDGSLQLKKGGMAAELHENLVEFTKNEVPELVVIECTKDELLPER
KIKVGACRLFEIMPLHYNLFLRQKTCAFTQFLQHNRHRLPCQVGTNPYSR
EWGHMLNRLMRPKTNEAINCDYSGFDGLLNPQLIECIARMINRLYALSGE
SDVQQAQRYNMLMALVGRYAFVGQQVYKVNCGLPSGFALTVVVNSVFNEI
LIRYAYKKLAPAPERNRFGSTVCLLVYGDDNLISVSPSIASWFTGEAIRI
TLAEKKVKITDGSDKDAPTIEAKSFWELDFLKRKFLKLDNGIVQAPLDRS
AIFSSLYWLTPDKSKFHESQKPSDFQGEVDVIEELLLNVNVALMELYLHN
DVAEFQRVRGFYAQRLPLMVSQLRTWAFCEAFHSAQQTGMQKYDPAVVLD
HMSGVDFKRFMHMSEQGNKAHFYTEMLGVSGPHYKPQEGDFIVSNQPLKP
GVQGEYVPIVFGEGIGGLPTKKWVGDFGKPSQLKNSKGYLITGLLREQIE
AGKRLIFMGPAPYVANNAALISFGSAHKMLIQKDALAHYRNVIPESTSGL
EQYFDAPIPQASVGTFYFGDGETYTALCEYKDGKVLQYEGLPTAILNQAA
KDRKVPCMVARQWKSKFTVRMACDSNMCPHHSATCANFELAFKQCWLSKC
KCAGNNVSKWYGTKFS
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix