POL1_TORVR
RNA1 polyprotein
MSSICFAGGNHARLPSKAAYYRAISDRELDREGRFPCGCLAQYTVQAPPP
AKTQEKAVGRSADLQKGNVAPLKKQRCDVVVAVSGPPPLELVYPARVGQH
RLDQPSKGPLAVPSAKQTSTAMEVVLSVGEAALTAPWLLCSYKSGVSSPP
PPMTQRQQFAAIKRRLVQKGQQIIRELIRARKAAKYAAFAARKKAAAVAA
QKARAEAPRLAAQKAAIAKILRDRQLVSLPPPPPPSAARLAAEAELASKS
ASLQRLKAFHRANRVRPVLNNSFPSPPLACKPDPALLERLRLATPSRCTV
ATKRQRDFVVAPLATQIRVAKCASHQEAYDSCRSILIEEWPESRYLFGPL
SFVGDWEHVPGMLMQYRLCVLFSMVRDVMPALSLVADTLHALRSGTAPNI
VFKNAMSTANQILECSHSSHAAQGFGNFLSRGKSAAINLASGLSSFVGEK
VVSGANHVVNKASEVIVDKLFVPFVKLLREHFDDTIGKWIPKLLGATQKI
EELWRWSLEWAQNMSKKLDVSLRVLRGSALVGVGLLLVSGILYFAEQLLR
SFGLLIVAGSFISMFVGGCLLAYAGSMAGIFDEQMMRVRGILCEIPMLLY
LKAQPDPFFPKKSGGRAPTQGLTDVFGVPLSIMNAIGDGLVHHSLDTLTL
MGKFGAAMDNVRKGITCMRSFVSWLMEHLALALDKITGKRTSFFRELATL
INFDVEKWVRDSQQYLLAAEIYVDGDTVVMDTCRHLLDKGLKLQRMMVSA
KSGCSFNYGRLVGDLVKRLSDLHKRYCASGRRVHYRLAPFWVYLYGGPRC
GKSLFAQSFMNAAVDFMGTTVDNCYFKNARDDFWSGYRQEAICCVDDLSS
CETQPSIESEFIQLITTMRYGLNMAGVEEKGASFDSKMVITTSNFFTAPT
TAKIASKAAYNDRRHACILVQRKEGVAYNPSDPAAAAEAMFVDSTTQHPL
SEWMSMQELSAELLLRYQQHREAQHAEYSYWKSTSRTSHDVFDILQKCVN
GDTQWLSLPVDVIPPSIRQKHKGNRVFAIDGRIFMFDYMTLEYDEIKEKE
NLDARHLEARILEKYGDTRLLLEKWGANGVVAQFIEQLLEGPSNVASLEV
LSKDSLESHKEFFSTLGLIERATLRAVQKKIDAAREDLMHLSGLKPGRSL
TELFVEAYDWVYANGGKLLLVLAAVILILFFGSACIKLMQAIFCGAAGGT
VSMAAVGKMTVQSTIPSGSYADVYNARNMTRVFRPQSVQGSSLAEAQFNE
SHAVNMLVRIDLPDGNIISACRFRGKSLALTKHQALTIPPGAKIHIVYTD
NNGNTKAPLTHFFQPTGPNGEHFLRFFNGTEVCIYSHPQLSALPGAPQNY
FLKDVEKISGDIAIKGCGIKLGRTSVGECVGVKDNEPVLNHWRAVAKVRT
TKITIDNYSEGGDYSNDLPTSIISEYVNSPEDCGALLVAHLEGGYKIIGM
HVAGSSYPVEVDGVQMPRYISHASFFPDYSSFAPCQSSVIKSLIQEAGVE
ERGVSKVGHIKDPAETPHVGGKTKLELVDEAFLVPSPVEVKIPSILSKDD
PRIPEAYKGYDPLGDAMEKFYEPMLDLDEDVLESVMADMYDEFYDCQTTL
RIMSDDEVINGSDFGFNIEAVVKGTSEGYPFVLSRRPGEKGKARFLEELE
PQPGDTKPKYKLVVGTEVHSAMVAMEQQARTEVPLLIGMDVPKDERLKPS
KVLEKPKTRTFVVLPMHYNLLLRKYVGILCSSMQVNRHRLACAVGTNPYS
RDWTDIYQRLAEKNSVALNCDYSRFDGLLNYQAYVHIVNFINKLYNDEHS
IVRGNLLMAMYGRWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLIRYV
YRITVPRPLVNNFKQEVCLIVYGDDNLISIKPDTMKYFNGEQIKTILAKY
KVTITDGSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAPLDLQAIYSS
LYYINPQGNILKSLFLNAQVALRELYLHGDVEQFTAVRNFYVNQIGGNFL
SLPQWRHCASFHDEQYSQWKPWSPVKFLEVDVPDAKFLQHKAPATALSIV
ADRLAVAGPGWRNKDPDRYLLVSLTSLKANEGGLYFPVDYGEGTGQQATE
ASIRAYRRLKDHRVRHMRDSWNEGKTIVFRCEGPFVSGWAAAISFGTSVG
MNAQDLLINYGIQGGAHKEYLGRYFVGARFKELERYDRPFQSRIIAS
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix