POL1_TRSVB
RNA1 polyprotein
MGFTCPNSDCLYSRSEWSNRALREEGLSFSMRCPGACCGAMLVRKQQEPE
AVDQRHSPERVRIAPHQNVCAGLPGVGPSKCPKHSQVPLAPKSKSVPARA
TVSASPLKKQHCDVVVTVGPPADLELVYPALVSKGSANPPKVGKKSFNEA
LLEKRAAYQVRTAVPPPGPIRVVKTAATPVKVEKVRFPKGAVAFNGANFI
DAKGYVVLSAGALKILRGVQKLRRQQARSARRMAACRRVRLAVFAARLPS
LLRKADEATSGGFKYVDLNAPRVVRKAEKRPKKKPAKKAVRPASPVEEEI
NWDDFIIPESERTASPMKEEKPKRSLVPNSLGFGWWRPASGNLWDVVSQC
QRACEGTFLEASAEACLVRAGVDDVALSVWARISKSVVQLSAYYDVNTLL
ENYTALSECTMDELQSVAVQLDSEYQELGPPTHFTCGLSNWARGAGKILY
NFVAPTVEGIAGAGCRIVERAYELSKTVIDEIFSKMKSLFYDCFGNLFGH
LNVLLSTIDSFWARASTWIMNILEKTHDCLKVLRDSAVWSLLLILVGGLI
LLSERFLQSIGIISKPGTILGIFLATFLGIFGYTFFRKDDTLVSDLLCAF
KIAITNLFRTKPGPPGSPIIVDGDVVIPESAVAMSTCSFMGGLDIAIAAI
GNVGASILGFKVGALQYAAKIATCLDQLRKGKDVLKEMTCWIIETLGALW
NKMTGREATFFDEVSAIVAVDIREWLEESQNLCLAAQTFSIGDKIVLEQC
ERLIADGHKLLRGMGDADRKLSSSFLSTVQRKVSDLEKIHTQSVRAGYFE
GRRMEPFWVYIHGPSHCGKSLLMEPMSRELLRAGGFSESSIYTKNSCDKY
WSRYRRQACVQIDDLSAGKTDPSLESQLINLVASKEVPLDMAEVEDKGIL
FDSAILVTSSNTAHVPTNANVNHAEAYKNRMNVVIQCRRKPEYSPMGMEL
EGTFQPFDPRNPQASIECMLQHRETHAPITGWISAGAAMAEAVNQFRLHR
EKEMILQSNHLSSFRPAHPIYTECATFLSMYARDASFVPPVDLGCKWEIP
SGYMTIAAVDGRVFGFSQLGVCTEISKQMKFTEEMEQYTLDKFAPDITKT
MASQSRFKLVGAFLKGMIREEDNVVSLTSLGPKSTATQREFFETLGLAER
VYLRAVQKKVNKIRTDPAFDVEALHARLLSTIATSYEYVRTYGPKIFPIL
MGFVCVVFACYGFIMPLLSFASGGSAVGGMVAMEQIAAASVVSSGSSPVA
HRNRAPPVQPRYARHRLAGASAEDAYAYEEMMVVLYVDSTVAPVVNAVRG
PGRQFFNSHQALMIPNNSTVVAHFSTRDVVEIHWEHDVVRKGEKKDTEII
QYRCPSIPELPSRCKKYFEYDLERDFPGPFTLDASCYRMQSPGKIDIELV
SWTDHDRELRTRPLVIADPFGEDRYRREIPQYIQYGRPDQLHDCGAICVA
KIGGQHRIVGLVISTDKHNTGVGLLPSALHMTTCSLSYVPEEWEEAPRGL
KKLGWNDRSELPHMPRKTQYVAVNEDLAIPFDNPKIPSVLVSDDPRTVGT
PVEGKDPVLVAMEKFYEPMTDFTEEEVRPGQTEVSLFEQVCDDIVQTWFD
AGAEFEDVEDDVVINGDDDFDKLIMDTSEGYPYVLERTHGEKGKTRYFEG
GPGAYTLKPGTSVYNDYHKLQEEVQVEGGIPEMVCIECPKDELLVERKVL
QKLGTRNFEILELPKNMLFRKKFLHWALFLSDMRWCLPCQVGIVVQGREW
GLLMDRLAAKNSVAYNCDYSKFDGLMSCQVLDAIGKMVNKCYSNANPNLK
KKGKGELPGSPPQLARYNLLMSIFGRKCLARSQVFEVRGGIRRGALTVLL
NSVFNEILIRYVYKTVIPSPEFNRFETFVTLVVYGDDNLIAVDPSMQKIF
TGEVIKKTLARKKITITDGSDKLSPVLEAKPLAQLDFLKRSFLVSDSGQV
MPALDRTCIYSSLLYLRSADCDPIPLLHQNVQNALQELYYRQDREEFDNL
RTFYLERLPMWRNGQHRLLDWNQCAEHWRARYTGCPSDNPAGVLDMLVDP
RCKSFMLPAGPANWSMPIADRIFVCGPKFSASGPSYTLCFNRLAAGETGV
QIKPVHAATQGAMPTAKFVESFRSIKKRPELELAISAYESGSNLYFKGCA
PYNDIWACAISFCSAFGYAQKQVLLHMYDNCKRLGASSLRSYFNKSLVGD
GCARRCEIHTTPAIAKQVERLLPQVQCKHCEYDPEFASKPTTQLRKCTDP
GVDGGKAMYIVRGLGRTAAKLVCSDICDGHLMSCNTSFDKMVVNLFRRSC
FKCL
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix