POLG_HAV88
Genome polyprotein
MNMSRQGIFQTVGSGLDHILSLADIEEEQMIQSVDRTAVTGASYFTSVDQ
SSVHTAEVGSHQVEPLKTSVDKPGSKKTQGEKFFLIHSADWLTTHALFHE
VAKLDVVKLLYNEQFAVQGLLRYHTYARFGIEIQVQINPTPFQQGGLICA
MVPGDQSYGSIASLTVYPHGLLNCNINNVVRIKVPFIYTRGAYHFKDPQY
PVWELTIRVWSELNIGTGTSAYTSLNVLARFTDLELHGLTPLSTQMMRNE
FRVSTTENVVNLSNYEDARAKMSFALDQEDWKSDPSQGGRIKITHFTTWT
SIPTLAAQFPFNASDSVGQQIKVIPVDPYFFQMTNSNPDQKCITALASIC
QMFCFWRGDLVFDFQVFPTKYHSGRLLFCFVPGNELIDVSGITLKQATTA
PCAVMDITGVQSTLRFRVPWISDTPYRVNRYTKSAHQKGEYTAIGKLIVY
CYNRLTSPSNVASHVRVNVYLSAINLECFAPLYHAMDVTTQVGDDSGGFS
TTVSTEQNVPDPQVGITTMRDLKGRANRGKMDVSGVQAPVGAITTIEDPV
LAKKVPETFPELKPGESRHTSDHMSIYKFMGRSHFLCTFTFNSNNKEYTF
PITLSSTSNPPHGLPSTLRWFFNLFQLYRGPLDLTIIITGATDVDGMAWF
TPVGLAVDTPWVEKESALSIDYKTALGAVRFNTRRTGNIQIRLPWYSYLY
AVSGALDGLGDKTDSTFGLVSIQIANYNHSDEYLSFSCYLSVTEQSEFYF
PRAPLNSNAMLSTETMMSRIAAGDLESSVDDPRSEEDRRFESHIESRKPY
KELRLEVGKQRLKYAQEELSNEVLPPPRKMKGLFSQAKISLFYTEDHEIM
KFSWRGVTADTRALRRFGFSLAAGRSVWTLEMDAGVLTGRLVRLNDEKWT
EMKDDKIVSLVEKFTSNKHWSKVNFPHGMLDLEEIAANSKDFPNMSETDL
CFLLHWLNPKKINLADRMLGLSGVQEIKEQGIGLIAECRTFLDSIAGTLK
SMMFGFHHSVTVEIINTVLCFVKSGILLYVVQQLNQDEHSHIIGLLRVMN
YADIGCSVISCGKVFSKMLETVFNWQMDSRMMELRTQSFSNWLRDICSGI
TIFKSFKDAIYWLYTKLKDFYDVNYGKKKDVLNVLKDNQQKIERAIEEAD
NFCILQIQDVEKFEQYQKGVDLIQKLRTVHSMAQVDPSLMIHLSPLRDCI
ARVHQKLKNLGSINQAMVTRCEPVVCYLYGKRGGGKSLTSIALATKICKH
YGVEPEKNIYTKPVASDYWDGYSGQLVCIIDDIGQNTTDEDWSDFCQLVS
GCPMRLNMASLEEKGRHFSSPFIIATSNWSNPSPKTVYVKEAIDRRLHFK
IEVKPASFFKNPHNDMLNVNLAKTNDAIKDMSCVDLIMDGHNVSLMDLLS
SLVMTVEIRKQNMTEFMELWSQGISDDDNDSAVAEFFQSFPSGEPSNSKL
SSFFQSVTNHKWVAVGAAVGILGVLVGGWFVYKHFSRKEEEPIPTEGVYH
GVTKPKQVIKLDADPVESQSTLEIAGLVRKNLVQFGVGEKNGCVRWVMNA
LGVKDDWLLVPSHAYKFEKDYEMMEFYFNRGGTYYSISAGNVVIQSLDVG
FQDVVLMKVPTIPNFRDITEHFIKKGDVPRALNRLATFGQPVNGTPMLIS
EGPLKMEEKATYVHKKNDGTTVDLTVDQAWRGKGEGLPGMCGGALVSSNQ
SIQNAILGIHVAGGNSILVAKLVTQEMFQNIDKKIESQRIMKVEFTQCSM
NVVSKTLFRKSPIHHHIDKDMINFPAAMPFSRAEIDPMAVMLSKYSLPMV
EEPEGYKDVSVFFQNKVMGKSVLVDDFLDLDMAITGAPGIDAINMDSSPG
FPYVQERLTKRDLIWLDENGLLLGIHPRLAQRILFNTVMMENCSDLDVIF
TTCPKDELRPLDKVLESKTRAIDACPLDYTILCRMYWGPAISYFHLNPGF
HTGVAIGIDPDRQWDELFKTMIRFGDVGLDLDFSAFDASLSPFMIREAGR
IMSEISGTPSHFGTALINTIIYSKHLLYNCCYHVYGSMPSGSPCTALLNS
IINNINLYYVFSKIFRKSPVFFSQAVRILCYGDDVLIVFSRDIQIDNLDQ
IGQKIVHEFKQLGMTATSADKTVPQLKPVSELTFLKRSFNLVEDRVRPAI
SEKTIWSLVAWQRSNAEFEQNLENAQWFAFMHGFEFYQKFYYFVQSCLEK
EMIEYRLKSYDWWRMRFYDQCFVCDLS
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix