POLR_KYMVJ
RNA replicase polyprotein
MAFQLALDALASTSHKDPSLHPVLESVHDSLTDSLQTYPWMVPQDLQPFL
LKSGIPINSFGSSPHPHPAHKTLETHLLFTHWMHLCTQPSSVLFMKPQKF
MKLQRKNKFFQHLHNYRLTPTDSVRFPSTSPHLPNTPFVFMHDALMYYQP
EQILHLFHQVPQLTNLFCSLVTPPESHFTHLSLMPDLYTFTLKGQTLHYT
PEGHSAGSYNQPITALSWLKINSILSPNLNLSITILESWGPLHSILIQRG
LPLPDPKLLVRSLPPFSRSPDPETDLVSFQVPKSVELPQATFLSQPLRHR
LVPESVYNALFTYTRAVRTLRVSDPAGFVRTQSNKPEHKWVTPSAWDNLQ
TFALLNCPLRPNVVYHVLLNPLQKMKLYFSQHWRRLGVIAAPGLFCLSLL
LRSQKWSLPLPKAKSISVFRRNLLLPPKPHRPPLLPHPEQMLQEFKLPWH
RPPPKGKRNPFLTLLINLLHIPREICAGIRRYPSYYQSIQPKPLNPIQQF
RNQLLAQLHTLPLPKKFLSILPRARKDIPLLPRMSFTTVNLPLQPPMWLA
IGASLVPELAFLLSWLSGDVDLQTQHDIYHHHLHPENFTLSWTRTPYLAL
APSPFLPYAHSPLPPLPVNSSPLFPPPPPLPPSQPPLSQGPATQAPSAQP
TPGEPLLAPPTTELKPESSNPNNPNPSSSAGSNPPPKSSSSDNPPAPNKP
TPTSSSTTPPSPNLPLQFGSIHSPFLSDGQLNYSALPPPQDPTNTTLSLL
PEPKPPTEVQSPLMADPTCVGPAVSFSSLYPRDFFPNTASFLTRLRLSPP
TPLPMPKNNCLLTAVAPSLHINPHRLWTSLQEVLPDSLLSNSEIDSVGMS
TDLLTALSHLFNFQAVVHSERGDILFGLQSAKTVIHIYHTNGPPAHYSPP
PKIIGSNSPPSSQQHPLEQAALRFKYQGSHLPFSSFHSFTTSVQHAKNLI
SNMKNGFDGVMSTIEPSIRHQPGHSPREKFIALDAMIDLARPKTVSMFHL
AGFAGCGKTKPLQSLLSTRPFHSFRVSTPTTELRNEWKKDMNLPASQAFR
FCTWESSLLKQTKILVIDEIYKLPRGYLDLCILADPCLELVIILGDPLQG
EYHSTSPHSSNHQLQSETTRLLPFIDHYCWWTYRVPSHIADLFSVPSFNR
SEGHYQMAVRTADSYTPGHFNLVNSVATANAVIQLGFPATTISASQGVTH
HNRVTILLDKHSRLLSPSNTLVALTRSTVGVEFLGDIGSLSGTNNSSDMF
SRAIYRQPINLSSSFPRIFHLLPLLNKPISRRSTRLIGSHSPIFHNPRLT
NIHLPPHIPTSYSQDFVVSNPIFQGQADPRLDTHFLPPTRLPLQSELLPA
QLSQTTKPTDSFTNNTPFTPVYPGENFENLAAFFLPAHDPELKEVTRRDQ
TSAQFPWFDRPFSLSCQPSSLIAAKHSPSQDPTLLPFSIPKRLRFRKSDN
PHVLSAIDVLLGNQLFFNLCKAYRRNPTHVGPFNPALFAECIALNDYAQL
SSKTQATLVANHSRSDPDWRHTAVKIFAKSQHKVNDASIFGNWKACQTLA
LMHDFVILSLGPVKKYQRIFDALDRPPHLYTHCGKSPADLSAWCQTHLTG
QIKLTNDYTAFDQSQHGESVILEALKMKRLSIPSHLIQLHVHLKTNVATQ
FGPLTCMRLTGEPGTYDDNSDYNLAVIHSQFDMKDIPVMVSGDDSLIDRQ
PPLAQSWEATKRLLHLRFKTEKTTHPLFCGYYTGSAGAIRNPLALFSKLM
IAIDDEAIHDRRLSYLTEFSTGHQLGDALWTLLPESTQIYQSACFDYFCR
HSPPHEKALLSSFELPDSVISKISSSTKWLSKNAFYALPSKIRKAVIASR
HSSSFPENPDVSQLEFELLQSFQF
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix