| Visitors: | 312927 |
|---|---|
| # of TMPs: | 15327 |
| Server version: | v2.0.0 |
| Database release: | d.2.2 |
| Release date: | 22.07.2024 |
HTP viewer for R1AB_CVM2
R1AB_CVM2
Replicase polyprotein 1ab
Evidence:
Prediction
Reliability:
59.25
# of TM segments:
20
Cross ref(s)::
UniProt: R1AB_CVM2
MAKMGKYGLGFKWAPEFPWMLPNASEKLGSPERSEEDGFCPSAAQEPKTK GKTLINHVRVDCSRLPALECCVQSAIIRDIFVDEDPLNVEASTMMALQFG SAVLVKPSKRLSIQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF QLFTVQPDGVCLGNGRFIGWFVPVTAIPAYAKQWLQPWSILLRKGGNKGS VTSGHFRRAVTMPVYDFNVEDACEEVHLNPKGKYSRKAYALLKGYRGVKS ILFLDQYGCDYTGRLAKGLEDYGDCTLEEMKELFPVWCDSLDNEVVVAWH VDRDPRAVMRLQTLATIRSIGYVGQPTEDLVDGDVVVREPAHLLAANAIV KRLPRLVETMLYTDSSVTEFCYKTKLCDCGFITQFGYVDCCGDACDFRGW VPGNMMDGFLCPGCSKSYMPWELEAQSSGVIPKGGVLFTQSTDTVNRESF KLYGHAVVPFGSAVYWSPYPGMWLPVIWSSVKSYADLTYTGVVGCKAIVQ ETDAICRSLYMDYVQHKCGNLEQRAILGLDDVYHRQLLVNRGDYSLLLEN VDLFVKRRAEFACKFATCGDGLVPLLLDGLVPRSYYLIKSGQAFTSMMVN FSHEVTDMCMDMALLFMHDVKVATKYVKKVTGKLAVRFKALGVAVVRKIT EWFDLAVDTAASAAGWLCYQLVNGLFAVANGGITFLSDVPELVKNFVDKF KVFFKVLIDSMSVSVLSGLTVVKTASNRVCLAGCKVYEVVQKRLSAYVMP VGCNEATCLVGEIEPAVVEDDVVDVVKAPLTYQGCCKPPTSFEKICVVDK LYMAKCGDQFYPVVVDNDTIGVLDQCWRFPCAGKKVEFNDKPKVKEIPST RKIKINFALDATFDSVLSKACSEFEVDKDVTLDELLDVVLDAVESTLSPC KEHDVIGTKVCALLNRLAEDYVYLFDEGGEEVIAPKMYCSFSAPDDEDCV AADVVDADENQGDDADDSAALVTDTQEEDGVAKGQVGVAESDARLDQVEA FDIEKVEDPILNELSAELNAPADKTYEDVLAFDAIYSEALSAFYAVPGDE THFKVCGFYSPAIERTNCWLRSTLIVMQSLPLEFKDLEMQKLWLSYKSSY NKEFVDKLVKSVPKSIILPQGGYVADFAYFFLSQCSFKAYANWRCLKCDM DLKLQGLDAMFFYGDVVSHVCKCGTGMTLLSADIPYTLHFGLRDDKFCAF YTPRKVFRAACVVDVNDCHSMAVVDGKQIDGKVVTKFNGDKYDFMVGHGM AFSMSAFEIAQLYGSCITPNVCFVKGDVIKVLRRVGAEVIVNPANGRMAH GAGVAGAIAKAAGKSFIKETADMVKNQGVCQVGECYESTGGNLCKTVLNI VGPDARGHGKQCYSFLERAYQHINKCDDVVTTLISAGIFSVPTDVSLTYL IGVVTKNVILVSNNKDDFDVIEKCQVTSIAGTKALSLQLAKNLCRDVKFE TNACDSLFSDSCFVSSYDVLQEVELLRHDIQLDDDARVFVQAHMDNLPAD WRLVNKFDSVDGVRTVKYFECPGEIFVSSQGKKFGYVQNGSFKVASVSQI RALLANKVDVLCTVDGVNFRSCCVAEGEVFGKTLGSVFCDGINVTKVRCS AIHKGKVFFQYSGLSAADLVAVTDAFGFDEPQLLKYYNMLGMCKWPVVVC GNYFAFKQSNNNCYINVACLMLQHLSLKFHKWQWQEAWNEFRSGKPLRFV SLVLAKGSFKFNEPSDSTDFMRVVLREADLSGATCDFEFVCKCGVKQEQR KGVDAVMHFGTLDKGDLAKGYTIACTCGNKLVHCTQLNVPFLICSNKPEG KKLPDDVVAANIFTGGSLGHYTHVKCKPKYQLYDACNVSKVSEAKGNFTD CLYLKNLKQTFSSKLTTFYLDDVKCVEYNPDLSQYYCESGKYYTKPIIKA QFRTFEKVEGVYTNFKLVGHSIAEKFNAKLGFDCNSPFTEYKITEWPTAT GDVVLASDDLYVSRYSGGCVTFGKPVIWLGHEEASLKSLTYFNRPSVVCE NKFNVLPVDVSEPTDKGPVPAAVLVTGALSGAATAPGTAKEQKVCASDSV VDQVVSGFLSDLSGATVDVKEVKLNGVKKPIKVEDSVVVNDPTSETKVVK SLSIVDVYDMFLTGCRYVVWMANELSRLVNSPTVREYVKWGMTKIVIPAK LVLLRDEKQEFVAPKVVKAKVIACYSAVKWFFLYCFSWIKFNTDNKVIYT TEVASKLTFNLCCLAFKNALQTFNWNVVSRGFFLVATVFLLWFNFLYANV ILSDFYLPNIGFFPTFVGQIVAWVKTTFGIFTLCDLYQVSDVGYRSSFCN GSMVCELCFSGFDMLDNYDAINVVQHVVDRRVSFDYISLFKLVVELVIGY SLYTVCFYPLFGLIGMQLLTTWLPEFFMLETMHWSARFFVFVANMLPAFT LLRFYIVVTAMYKIFCLCRHVMYGCSRPGCLFCYKRNRSVRVKCSTVVGG TLRYYDVMANGGTGFCAKHQWNCLNCSAFGPGNTFITHEAAADLSKELKR PVNPTDSAYYLVTEVKQVGCSMRLFYERDGQRVYDDVSASLFVDMNGLLH SKVKGVPETHVVVVENEADKAGFLNAAVFYAQSLYRPMLLVEKKLITTAN TGLSVSQTMFDLYVDSLLGVLDVDRKSLTSFVNAAHNSLKEGVQLEQVMD TFIGCARRKCAIDSDVETKSITKSIMSAVNAGVDFTDESCNNLVPTYVKS DTIVAADLGVLIQNNAKHVQANVAKAANVACIWSVDAFNQLSADLQHRLR KACSKTGLKIKLTYNKQEANVPILTTPFSLKGGAVFSKVLQWLFVVNLIC FIVLWALMPTYAVHKSDMQLPLYASFKVIDNGVLRDVTVTDACFANKFIQ FDQWYESTFGLVYYRNSRACPVVVAVIDQDIGYTLFNVPTKVLRYGFHVL HFITHAFATDSVQCYTPHMQIPYDNFYASGCVLSSLCTMLAHADGTPHPY CYTEGIMHNASLYDSLAPHVRYNLANSNGYIRFPEVVSEGIVRIVRTRSM TYCRVGLCEDAEEGVCFNFNSSWVLNNPYYRAMPGTFCGRNAFDLIHQVL GGLVRPIDFFALTASSVAGAILAIIVVLAFYYLIKLKRAFGDYTSVVVIN VIVWCINFLMLFVFQVYPTLSCLYACFYFYTTLYFPSEISVVMHLQWLVM YGAIMPLWFCIIYVAVVVSNHALWLFSYCRKLGTEVRSDGTFEEMSLTTF MITKESYCKLKNSVSDVAFNRYLSLYNKYRYFSGKMDTAAYREAACSQLA KAMETFNHNNGNDVLYQPPTASVTTSFLQSGIVKMVFPTSKVEPCVVSVT YGNMTLNGLWLDDKVYCPRHVICSSADMTDPDYSNLLCRVISSDFCVMSG RMSLTVMSYQMQGSLLVLTVTLQNPNTPKYSFGVVKPGETFTVLAAYNGK SQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLTGDSVRFVYMHQLELSTGC HTGTDFSGNFYGPYRDAQVVQLPVQDYTQTVNVVAWLYAAILNRCNWFVQ SDSCSLEEFNVWAMTNGFSSIKADLVLDALASMTGVTVEQILAAIKRLYS GFQGKQILGSCVLEDELTPSDVYQQLAGVKLQSKRTRVVKGTCCWILAST LLFCSIISAFVKWTMFMYVTTHMLGVTLCALCFVSFAMLLVKHKHLYLTM FIMPVLCTLFYTNYLVVYKQSFRGLAYAWLSHFVPAVDYTYMDEVLYGVV LLVAMVFVTMRSINHDVFSVMFLVGRLVSLVSMWYFGANLEEEVLLFLTS LFGTYTWTTMLSLATAKVIAKWLAVNVLYFTDVPQVKLVLLSYLCIGYVC CCYWGVLSLLNSIFRMPLGVYNYKISVQELRYMNANGLRPPRNSFEALVL NFKLLGIGGVPVIEVSQIQSRLTDVKCVNVVLLNCLQHLHIASSSKLWQY CSTLHNEILATSDLSVAFDKLAQLLVVLFANPAAVDSKCLASIEEVSDDY VRDSTVLQALQSEFVNMASFVEYELAKKNLDEAKASGSANQQQIKQLEKA CNIAKSAYERDRAVARKLERMADLALTNMYKEARINDKKSKVVSALQTML FSMIRKLDNQALNSILDNAVKGCVPLNAIPSLTSNTLTIIVPDKQVFDQV VDNVYVTYAGNVWHIQSIQDADGAVKQLNEIDVNITWPLVIAANRHNEVS SVVLQNNELMPQKLRTQVVNSGSDMNCNTPTQCYYNTTGMGKIVYAILSD CDGLKYTKIVKEDGNCVVLELDPPCKFSVQDVKGLKIKYLYFVKGCNTLA RGWVVGTLSSTVRLQAGTATEYASNSAIRSLCAFSVDPKKTYLDYIQQGG APVTNCVKMLCDHAGTGMAITIKPEATTNQDSYGGASVCIYCRSRVEHPD VDGLCKLRGKFVQVPLGIKDPVSYVLTHDVCQVCGFWRDGSCSCVGTGSQ FQSKDTNFLNRVRGTSVNARLVPCASGLDTDVQLRAFDICNANRAGIGLY YKVNCCRFQRADEDGNTLDKFFVIKRTNLEVYNKEKECYELTKECGVVAE HEFFTFDVEGSRVPHIVRKDLSKYTMLDLCYALRHFDRNDCSTLKEILLT YAECDESYFQKKDWYDFVENSDIINVYKKLGPIFNRALLNTAKFADTLVE AGLVGVLTLDNQDLYGQWYDFGDFVKTVPGCGVAVADSYYSYMMPMLTMC HALDSELFINGTYREFDLVQYDFTDFKLELFNKYFKYWSMTYHPNTCECE DDRCIIHCANFNILFSMVLPKTCFGPLVRQIFVDGVPFVVSIGYHYKELG VVMNMDVDTHRYRLSLKDLLLYAADPALHVASASALLDLRTCCFSVAAIT SGVKFQTVKPGNFNQDFYEFILSKGLLKEGSSVDLKHFFFTQDGNAAITD YNYYKYNLPTMVDIKQLLFVLEVVNKYFEIYDGGCIPATQVIVNNYDKSA GYPFNKFGKARLYYEALSFEEQDEVYAYTKRNVLPTLTQMNLKYAISAKN RARTVAGVSILSTMTGRMFHQKCLKSIAATRGVPVVIGTTKFYGGWDDML RRLIKDVDSPVLMGWDYPKCDRAMPNILRIISSLVLARKHDSCCSHTDRF YRLANECAQVLSEIVMCGGCYYVKPGGTSSGDATTAFANSVFNICQAVSA NVCSLMACNGHKIEDLSIRELQKRLYSNVYRADHVDPAFVNEYYEFLNKH FSMMILSDDGVVCYNSEFASKGYIANISAFQQVLYYQNNVFMSEAKCWVE TDIEKGPHEFCSQHTMLVKMDGDEVYLPYPDPSRILGAGCFVDDLLKTDS VLLIERFVSLAIDAYPLVYHENPEYQNVFRVYLEYIKKLYNDLGNQILDS YSVILSTCDGQKFTDETFYKNMYLRSAVMQSVGACVVCSSQTSLRCGSCI RKPLLCCKCAYDHVMSTDHKYVLSVSPYVCNSPGCDVNDVTKLYLGGMSY YCEDHKPQYSFKLVMNGMVFGLYKQSCTGSPYIEDFNKIASCKWTEVDDY VLANECTERLKLFAAETQKATEESFKQCYASATIREIVSDRELILSWEIG KVRPPLNKNYVFTGYHFTSNGKTVLGEYVFDKSELTNGVYYRATTTYKLS VGDVFILTSHAVSSLSAPTLVPQENYTSIRFASVYSVPETFQNNVPNYQH IGMKRYCTVQGPPGTGKSHLAIGLAVYYCTARVVYTAASHAAVDALCEKA YKFLNINDCTRIVPAKVRVDCYDKFKVNDTTRKYVFTTINALPELVTDII VVDEVSMLTNYELSVINSRVRAKHYVYIGDPAQLPAPRVLLNKGTLEPRY FNSVTKLMCCLGPDIFLGTCYRCPKEIVDTVSALVYHNKLKAKNDNSSMC FKVYYKGQTTHESSSAVNMQQIYLISKFLKANPSWSNAVFISPYNSQNYV AKRVLGLQTQTVDSAQGSEYDFVIYSQTAETAHSVNVNRFNVAITRAKKG ILCVMSSMQLFESLNFSTLTLDKINNPRLQCTTNLFKDCSRSYAGYHPAH APSFLAVDDKYKVGGDLAVCLNVADSAVTYSRLISLMGFKLDLTLDGYCK LFITRDEAIRRVRAWVGFDAEGAHATRDSIGTNFPLQLGFSTGIDFVVEA TGMFAERDGYVFKKAVARAPPGEQFKHLVPLMSRGQKWDVVRIRIVQMLS DHLVDLADSVVLVTWAASFELTCLRYFAKVGKEVVCSVCNKRATCFNSRT GYYGCWRHSYSCDYLYNPLIVDIQQWGYTGSLTSNHDLICSVHKGAHVAS SDAIMTRCLAVHDCFCKSVNWSLEYPIISNEVSVNTSCRLLQRVMFRAAM LCNRYDVCYDIGNPKGLACVKGYDFKFYDASPVVKSVKQFVYKYEAHKDQ FLDGLCMFWNCNVDKYPANAVVCRFDTRVLNKLNLPGCNGGSLYVNKHAF HTSPFTRAAFENLKPMPFFYYSDTPCVYMEGMESKQVDYVPLRSATCITR CNLGGAVCLKHAEDYREYLESYNTATTAGFTFWVYKTFDFYNLWNTFTRL QSLENVVYNLVNAGHFDGRAGELPCAVIGEKVIAKIQNEDVVVFKNNTPF PTNVAVELFAKRSIRPHPELKLFRNLNIDVCWSHVLWDYAKDSVFCSSTY KVCKYTDLQCIESLNVLFDGRDNGALEAFKKCRDGVYINTTKIKSLSMIK GPQRADLNGVVVEKVGDSDVEFWFAMRRDGDDVIFSRTGSLEPSHYRSPQ GNPGGNRVGDLSGNEALARGTIFTQSRFLSSFAPRSEMEKDFMDLDEDVF IAKYSLQDYAFEHVVYGSFNQKIIGGLHLLIGLARRQQKSNLVIQEFVPY DSSIHSYFITDENSGSSKSVCTVIDLLLDDFVDIVKSLNLNCVSKVVNVN VDFKDFQFMLWCNEEKVMTFYPRLQAAADWKPGYVMPVLYKYLESPLERV NLWNYGKPITLPTGCLMNVAKYTQLCQYLNTTTLAVPANMRVLHLGAGSD KDVAPGSAVLRQWLPAGSILVDNDINPFVSDSVASYYGNCITLPIACQWD LIISDMYDPLTKNIGEYNVSKDGFFTYLCHLIRDKLALGGSVAIKITEFS WNAELYSLMGKFAFWTIFCTNVNASSSEGFLIGINWLNRTRTEIDGKTMH ANYLFWRNSTMWNGGAYSLFDMSKFPLKVAGTAVVSLKPDQINDLVLSLI EKGKLLVRDTRKEVFVGDSLVNVK
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix