R1AB_GLRV3
Replicase polyprotein 1ab
MDYIRPLRVFSFPHVNNTLEYVRYNKANGDVGAFLTTMKFIGNVKLSDFT
PRCAAMIYIGKLTKGVKRTFVPPPVKGFARQYAVVSGSVSALRGDGKKVL
MEARTSTSATSDVSDFDVVFEAVSNALLVVHYHRVVPYAPVKREQPKPAV
KQDEQKPKRQASHWAVKPTAVGVHVPLPKKQEALEPAQSVPQQSLEEKAA
LTFGLFFSKGGGDESDAVILRKGKLFNRALNVPIDVKNTFVWAKIWDEAS
RRRGYFYVKDRAVKFFPIVRGRATIEDFIVNTAPGCDVALPRIELWSMRE
RAFVCTTKGWCWFNNERLRGEIYRRRCFSSSFSIGFLMHLGFRSLKVIRF
AGTNILHMPSLNEERTFGWKGGDVYLPNVPKTAIVAGDRTRLGGEILASV
ANALNQEEVYSSVVSSITNRLVLRDQSALLSHLDTKLCDMFSQRDAMIRE
KPSHRCDVFLKPREREKLRELFPELSIQFSDSVRSSHPFANAMRSCFNGI
FSRRCGNVCFFDIGGSFTYHVKAGHVNCHVCNPVLDVKDVKRRINEILFL
STAGGDSYVSSDLLTEAASKSVSYCSRESQNCDSRADAGFMVDVYDISPQ
QVAEAMDKKGALVFDIALMFPVELLYGNGEVYLEELDTLVKREGDYLAYN
VGQCGEMYEHSFSNVSGFFTFSYVRTSSGNVFKLEYEGYRCGYHHLTMCR
AQKSPGTEVTYRSLVPSFVGKSLVFIPVVAGSSVSFKTIVLDSDFVDRIY
SYALNTIGTFENRTFEYAVGAVRSQKTHVITGSRVVHSKVDISPDDMWGL
VVAVMAQAIKDRAKSIRSYNFIKASEGSLAGVFKLFFQTVGDCFSNAVSV
YAKAMVHDNFNVLETLMSMPRAFIRKVPGSVVVTICTSGASDRLELRGAF
DISKETFGRKLKNSRLRVFSRAIVEDSIKVMKAMKTEDGKPLPITEDSVY
AFIMGNVSNVHCTRAGLLGGSKATVVSSVSKGLVARGAATKAFSGITSFF
STGSLFYDRGLTEDERLDALVRTENAINSPVGILETSRVAVSKVVAGTKE
FWSEVSLNDFTTFVLRNKVLIGIFVASLGAAPIAWKYRRGIAANARRYAG
SSYETLSSLSSQAAGGLRGLTSSTVSGGSLVVRRGFSSAVTVTRATVAKR
QVPLALLSFSTSYAISGCSMLGIWAHALPRHLMFFFGLGTLLGARASANT
WKFGGFSNNWCAVPEVVWRGKSVSSLLLPITLGVSLIIRGLLNDTIPQLA
YVPPVEGRNVYDETLRYYRDFDYDEGAGPSGTQHEAVPGDDNDGSTSSVS
SYDVVTNVRDVGISTNGEVTGEEETHSPRSVQYTYVEEEVAPSAAVAERQ
GDPSGSGTADAMAFVESVKKGVDDVFHQQSSGETAREVEVDGKGLLPESV
VGEAPTQERGRAADGNTAQTAVNEGDREPVQSSLVSSPQADIPKVTQSEV
HAQKEVKQEVPLATVSGATPIVDEKPAPSVTTRGVKIIDKGKAVAHVAEK
KQVQVEQPKQRSLTINEGKAGKQLCMFRTCSCGVQLDVYNEATIATRFSN
AFTFVDNLKGRSAVFFSKLGEGYTYNGGSHVSSGWPRALEDILTAIKYPS
VFDHCLVQKYKMGGGVPFHADDEECYPSDNPILTVNLVGKANFSTKCRKG
GKVMVINVASGDYFLMPCGFQRTHLHSVNSIDEGRISLTFRATRRVFGVG
RMLQLAGGVSDEKSPGVPNQQPQSQGATRTITPKSGGKALSEGSGREVKG
RSTYSIWCEQDYVRKCEWLRADNPVMALEPDYTPMTFEVVKTGTSEDAVV
EYLKYLAIGIERTYRALLMARNIAVTTAEGVLKVPNQVYESLPGFHVYKS
GTDLIFHSTQDGLRVRDLPYVLIAEKGIFTKGKDVDAVVALGDNLFVCDD
ILVFHDAINLIGALKVARCGMVGESFKSFEYKCYNAPPGGGKTTTLVDEF
VKSPNSTATITANVGSSEDINMAVKKRDPNLEGLNSATTVNSRVVNFIVR
GMYKRVLVDEVHMMHQGLLQLGVFATGASEGLFFGDINQIPFINREKVFR
MDCAVFVPKKESVVYTSKSYRCPLDVCYLLSSMTVRGTEKCYPEKVVSGK
DKPVVRSLSKRPIGTTDDVAEINADVYLCMTQLEKSDMKRSLKGKGKETP
VMTVHEAQGKTFSDVVLFRTKKADDSLFTKQPHILVGLSRHTRSLVYAAL
SSKLDDKVGTYISDASPQSVSDALLTRSPRLVAFEVYERMNFGPTFEGEL
VRKIPTSHFVAVNGFLEDLLDGCPAFDYDFFEDDFETSDQSFLIEDVRIS
ESFSHFTSKIEDRFYSFIRSSVGLPKRNTLKCNLVTFENRNFNADRGCNV
GCDDSVAHELKEIFFEEVVNKARLAEVTESHLSSNTMLLSDWLDKRAPNA
YKSLKRALGSFVFHPSMLTSYTLMVKADVKPKLDNTPLSKYVTGQNIVYH
DRCVTALFSCIFTACVERLKYVVDERWLFYHGMDTAELAAALRNNLGDIR
QYYTYELDISKYDKSQSALMKQVEELILLTLGVDREVLSTFFCGEYDSVV
RTMTKELVLSVGSQRRSGGANTWLGNSLVLCTLLSVVLRGLDYSYIVVSG
DDSLIFSRQPLDIDTSVLSDNFGFDVKIFNQAAPYFCSKFLVQVEDSLFF
VPDPLKLFVKFGASKTSDIDLLHEIFQSFVDLSKGFNREDVIQELAKLVT
RKYKHSGWTYSALCVLHVLSANFSQFCRLYYHNSVNLDVRPIQRTESLSL
LALKARILRWKASRFAFSIKRG
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix