| Visitors: | 312927 |
|---|---|
| # of TMPs: | 15327 |
| Server version: | v2.0.0 |
| Database release: | d.2.2 |
| Release date: | 22.07.2024 |
HTP viewer for R1A_CVBEN
R1A_CVBEN
Replicase polyprotein 1a
Evidence:
TOPDOM
Reliability:
84.87
# of TM segments:
8
Cross ref(s)::
UniProt: R1A_CVBEN
MSKINKYGLELHWAPEFPWMFEDAEEKLDNPSSSEVDIVCSTTAQKLETG GICPENHVMVDCRRLLKQECCVQSSLIREIVMNTRPYDLEVLLQDALQSR EAVLVTPPLGMSLEACYVRGCNPNGWTMGLFRRRSVCNTGRCAVNKHVAY QLYMIDPAGVCFGAGQFVGWVIPLAFMPVQSRKFIVPWVMYLRKCGEKGA YNKDHKRGGFEHVYNFKVEDAYDLVHDEPKGKFSKKAYALIRGYRGVKPL LYVDQYGCDYTGGLADGLEAYADKTLQEMKALFPIWSQELPFDVTVAWHV VRDPRYVMRLQSASTIRSVAYVANPTEDLCDGSVVIKEPVHVYADDSIIL RQHNLVDIMSCFYMEADAVVNAFYGVDLKDCGFVMQFGYIDCEQDLCDFK GWVPGNMIDGFACTTCGHVYETGDLLAQSSGVLPVNPVLHTKSAAGYGGF GCKDSFTLYGQTVVYFGGCVYWSPARNIWIPILKSSVKSYDGLVYTGVVG CKAIVKETNLICKALYLDYVQHKCGNLHQRELLGVSDVWHKQLLLNRGVY KPLLENIDYFNMRRAKFSLETFTVCADGFMPFLLDDLVPRAYYLAVSGQA FCDYADKICHAVVSKSKELLDVSLDSLSAAIHYLNSKIVDLAQHFSDFGT SFVSKIVHFFKTFTTSTALAFAWVLFHVLHGAYIVVESDIYFVKNIPRYA SAVAQAFRSVAKVVLDSLRVTFIDGLSCFKIGRRRICLSGSKIYEVERGL LHSSQLPLDVYDLTMPSQVQKAKQKPIYLKGSGSDFSLADSVVEVVTTSL TPCGYSEPPKVADKICIVDNVYMAKAGDKYYPVVVDGHVGLLDQAWRVPC AGRRVTFKEQPTVNEIASTPKTIKVFYELDKDFNTILNTACGVFEVDDTV DMEEFYAVVIDAIEEKLSPCKELEGVGAKVSAFLQKLEDNSLFLFDEAGE EVLASKLYCAFTAPEDDDFLEESGVEEDDVEGEETDLTVTSAGEPCVASE QEESSEILEDTLDDGPCVETSDSQVEEDVEMSDFADLESVIQDYENVCFE FYTTEPEFVKVLDLYVPKATRNNCWLRSVLAVMQKLPCQFKDKNLQDLWV LYKQQYSQLFVDTLVNKIPANIVVPQGGYVADFAYWFLTLCDWQCVAYWK CIKCDLALKLKGLDAMFFYGDVVSHVCKCGESMVLIDVDVPFTAHFALKD KLFCAFITKRSVYKAACVVDVNDSHSMAVVDGKQIDDHRVTSITSDKFDF IIGHGMSFSMTTFEIAQLYGSCITPNVCFVKGDIIKVSKRVKAEVVVNPA NGHMAHGGGVAKAIAVAAGQQFVKETTDMVKSKGVCATGDCYVSTGGKLC KTVLNVVGPDARTQGKQSYALLERVYKHLNKYDCVVTTLISAGIFSVPSD VSLTYLLGTAEKQVVLVSNNQEDFDLISKCQITAVEGTKKLAERLSFNVG RSIVYETDANKLILSNDVAFVSTFNVLQDVLSLRHDIALDDDARTFVQSN VDVVPEGWRVVNKFYQINGVRTVKYFECPGGIDICSQDKVFGYVQQGSFN KATVAQIKALFLDKVDILLTVDGVNFTNRFVPVGESFGKSLGNVFCDGVN VTKHKCDINYKGKVFFQFDNLSSEDLKAVRSSFNFDQKELLAYYNMLVNC SKWQVVFNGKYFTFKQANNNCFVNVSCLMLQSLNLKFKIVQWQEAWLEFR SGRPARFVSLVLAKGGFKFGDPADSRDFLRVVFSQVDLTGAICDFEIACK CGVKQEQRTGVDAVMHFGTLSREDLEIGYTVDCSCGKKLIHCVRFDVPFL ICSNTPASVKLPKGVGSANIFKGDKVGHYVHVKCEQSYQLYDASNVKKVT DVTGNLSDCLYLKNLKQTFKSVLTTYYLDDVKKIEYNPDLSQYYCDGGKY YTQRIIKAQFKTFEKVDGVYTNFKLIGHTICDILNAKLGFDSSKEFVEYK VTEWPTATGDVVLATDDLYVKRYERGCITFGKPVIWLSHEQASLNSLTYF NRPLLVDENKFDVLKVDDVDDGGDISESDAKESKEINIIKLSGVKKPFKV EDSVIVNDDTSEIKYVKSLSIVDVYDMWLTGCRYVVRTANALSMAVNVPT IRKFIKFGMTLVSIPIDLLNLREIKPVFNVVKAVRNKISACFNFIKWLFV LLFGWIKISADNKVIYTTEVASKLTCKLVALAFKNAFLTFKWSVVARGAC IIATIFLLWFNFIYANVIFSDFYLPKIGFLPTFVGKIAQWIKSTFSLVTI CDLYSIQDVGFKNQYCNGSIACQFCLAGFDMLDNYKAIDVVQYEADRRAF VDYTGVLKIVIELIVSYALYTAWFYPLFALISIQILTTWLPELFMLSTLH WSVRLLVSLANMLPAHVFMRFYIIIASFIKLFILFRHVAYGCSKPGCLFC YKRNRSLRVKCSTIVGGMIRYYDVMANGGTGFCSKHQWNCIDCDSYKPGN TFITVEAALDLSKELKRPIQPTDVAYHTVTDVKQVGCYMRLFYERDGQRT YDDVNASLFVDYSNLLHSKVKGVPNMHVVVVENDADKANFLNAAVFYAQS LFRPILMVDKNLITTANTGTSVTETMFDVYVDTFLSMFDVDKKSLNALIA TAHSSIKQGTQICKVLDTFLSCARKSCSIDSDVDTKCLADSVMSAVSAGL ELTDESCNNLVPTYLKGDNIVAADLGVLIQNSAKHVQGNVAKIAGVSCIW SVDAFNQLSSDFQHKLKKACCKTGLKLKLTYNKQMANVSVLTTPFSLKGG AVFSYFVYVCFLLSLVCFIGLWCLMPTYTVHKSDFQLPVYASYKVLDNGV IRDVSVEDVCFANKFEQFDQWYESTFGLSYYSNSMACPIVVAVVDQDLGS TVFNVPTKVLRYGYHVLHFITHALSADGVQCYTPHSQISYSNFYASGCVL SSACTMFAMADGSPQPYCYTEGLMQNASLYSSLVPHVRYNLANAKGFIRF PEVLREGLVRIVRTRSMSYCRVGLCEEADEGICFNFNGSWVLNNDYYRSL PGTFCGRDVFDLIYQLFKGLAQPVDFLALTASSIAGAILAVIVVLVFYYL IKLKRAFGDYTSIVFVNVIVWCVNFMMLFVFQVYPTLSCVYAICYFYATL YFPSEISVIMHLQWLVMYGTIMPLWFCLLYISVVVSNHAFWVFAYCRRLG TSVRSDGTFEEMALTTFMITKDSYCKLKNSLSDVAFNRYLSLYNKYRYYS GKMDTAAYREAACSQLAKAMDTFTNNNGSDVLYQPPTASVSTSFLQSGIV KMVNPTSKVEPCIVSVTYGNMTLNGLWLDDKVYCPRHVICSASDMTNPDY TNLLCRVTSSDFTVLFDRLSLTVMSYQMQGCMLVLTVTLQNSRTPKYTFG VVKPGETFTVLAAYNGKPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVLMG DCVKFVYMHQLELSTGCHTGTDFNGDFYGPYKDAQVVQLPVQDYIQSVNF VAWLYAAILNNCNWFVQSDKCSVEDFNVWALSNGFSQVKSDLVIDALASM TGVSLETLLAAIKRLKNGFQGRQIMGSCSFEDELTPSDVYQQLAGIKLQS KRTRLVKGIVCWIMASTFLFSCIITAFVKWTMFMYVTTNMLSITFCALCV ISLAMLLVKHKHLYLTMYIIPVLFTLLYNNYLVVYKQTFRGYVYAWLSYY VPSVEYTYTDEVIYGMLLLIGMVFVTLRSINHDLFSFIMFVGRVISVVSL WYMGSNLEEEILLMLASLFGTYTWTTALSMAAAKVIAKWVAVNVLYFTDI PQIKIVLVCYLFIGYIISCYWGLFSLMNSLFRMPLGVYNYKISVQELRYM NANGLRPPKNSFEALMLNFKLLGIGGVPIIEVSQFQSKLTDVKCANVVLL NCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLFANPA AVDSKCLTSIEEVCDDYAKDNTVLQALQSEFVNMASFVEYEVAKKNLDEA RSSGSANQQQLKQLEKACNIAKSAYERDRAVARKLERMADLALTNMYKEA RINDKKSKVVSALQTMLFSMVRKLDNQALNSILDNAVKGCVPLNAIPSLA ANTLTIIVPDKSVYDQVVDNVYVTYAGNVWQIQTIQDSDGTNKQLNEISD DCNWPLVIIANRHNEVSATVLQNNELMPAKLKTQVVNSGPDQTCNTPTQC YYNNSNNGKIVYAILSDVDGLKYTKILKDDGNFVVLELDPPCKFTVQDVK GLKIKYLYFVKGCNTLARGWVVGTISSTVRLQAGTATEYASNSSILSLCA FSVDPKKTYLDFIQQGGTPIANCVKMLCDHAGTGMAITVKPDATTNQDSY GGASVCIYCRARVEHPDVDGLCKLRGKFVQVPVGIKDPVSYVLTHDVCQV CGFWRDGSCSCVSTDTTVQSKDTNFLNGFGVRV
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix