Visitors: | 312927 |
---|---|
# of TMPs: | 15327 |
Server version: | v2.0.0 |
Database release: | d.2.2 |
Release date: | 22.07.2024 |
HTP viewer for R1A_CVBQ
R1A_CVBQ
Replicase polyprotein 1a
Evidence:
TOPDOM
Reliability:
85.4
# of TM segments:
8
Cross ref(s)::
UniProt: R1A_CVBQ
MSKINKYGLELHWAPEFPWMFEDAEEKLDNPSSSEVDIVCSTTAQKLETG GICPENHVMVDCRRLLKQECCVQSSLIREIVMNTRPYDLEVLLQDALQSR EAVLVTPPLGMSLEACYVRGCNPNGWTMGLFRRRSVCNTGRCAVNKHVAY QLYMIDPAGVCFGAGQFVGWVIPLAFMPVQSRKFIAPWVMYLRKCGEKGA YIKDYKRGGFEHVYNFKVEDAYDLVHDEPKGKFSKKAYALIRGYRGVKPL LYVDQYGCDYTGGLADGLEAYADKTLQEMKALFPIWSQELPFDVTVAWHV VRDPRYVMRLQSASTIRSVAYVANPTEDLCDGSVVIKEPVHVYADDSIIL RQHNLVDIMSCFYMEADAVVNAFYGVDLKDCGFVMQFGYIDCEQDLCDFK GWVPGNMIDGFACTTCGHVYETGDLLAQSSGVLPVNPVLHTKSAAGYGGF GCKDSFTLYGQTVVYFGGCVYWSPARNIWIPILKSSVKSYDGLVYTGVVG CKAIVKETNLICKALYLDYVQHKCGNLHQRELLGVSDVWHKQLLLNRGVY KPLLENIDYFNMRRAKFSLETFTVCADGFMPFLLDDLVPRAYYLAVSGQA FCDYAGKICHAVVSKSKELLDVSVDSLGAAIHYLNSKIVDLAQHFSDFGT SFVSKIVHFFKTFTTSTALAFAWVLFHVLHGAYIVVESDIYFGKNIPRYA SAVAQAFRSGAKVGLDSLRVTFIDGLSCFKIGRRRICLSGSKIYEVERGL LHSSQLPLDVYDLTMPSQVQKTKQKGIYLKGSGSDFSLADSVVEVVTTSL TPCGYSEPPKVADKICIVDNVYMAKAGDKYYPVVVDGHVGLLDQAWRVPC AGRCVTFKEQPTVNEIASTPKTIKVFYELDKDFNTILNTACGEFEVDDTV DMEEFYAVVIDAIEEKLSPCKELEGVGAKVSAFLQKLEDNSLFLFDEAGE EVLAPKLYCAFTAPEDDDFLEESGVEEDDVEGEETDLTVTSAGEPCVASE QEESSEILEDTLDDGPCVETSDSQVEEDVQMSDFGDLESVIQDYENVCFE FYTTEPEFVKVLDLYVPKATRNNCWLRSVLAVMQKLPCQFKDKNLQDLWV LYKQQYSQLFVDTLVNKIPANIVVPQGGYVADFAYWFLTLCDWQCVAYWK CIKCDLALKLKGLDAMFFYGDVVSHVCKCGESMVLIDVDVPFTAHFALKD KLFCAFITKRSVYKAACVVDVNDSHSMAVVDGKQIDDHRITSITSDKFDF IIGHGTSFSMTTFEIAQLYGSCITPNVCFVKGDIIKVSKRVKAEVVVNPA NGHMAHGGGVAKAIAVAAGQQFVKETTDMVKSKGVCATGDCYVSTGGKLC KTVLNVVGPDARTQGKQSYALLERVYKHLNKYDCVVTTLISAGIFSVPSD VSLTYLLGTAKKQVVLVSNNQEDFDLISKCQITAVEGTKKLAERLSFNVG RSIVYETDANKLILSNDVAFVSTFNVLQDVLSLRHDIALDDDARTFVQSN VDVVPEGWRVVNKFYQINGVRPVKYFECPGGIDICSQDKVFGYVQQGSFN KATVAQIKALFLDKVDILLTVDGVNFTNRFVPVGESFGKSLGNVFCDGVN VTKHKCDINYKGKVFFQFDNLSSEDLKAVRSSFNFDQKELLAYYNMLVNC SKWQVVFNGKYFTFKQANNNCFVNVSCLMLQSLNLKFKIVQWQEAWLEFR SGRPARFVSLVLAKGGFKFGDPADSRDFLRVVFSQVDLTGAICDFEIACK CGVKQEQRTGVDAVMHFGTLSREDLEIGYTVDCSCGKKLIHCVRFDVPFL ICSNTPASVKLPKGVGSANIFKGDKVGHYVHVKCEQSYQLYDASNVKKVT DVTGNLSDCLYLKNLKQTFKSVLTTYYLDDVKKIEYKPDLSQYYCDGGKY YTQRIIKAQFKTFEKVDGVYTNFKLIGHTVCDILNAKLGFDSSKEFVEYK VTEWPTATGDVVLATDDLYVKRYERGCITFGKPVIWLSHEQASLNSLTYF NRPLLVDENKFDVLKVDDVDDGGDISESDAKEPKEINIIKLSGVKKPFKV EDSVIVNDDTSEIKYVKSLSIVDVYDMWLTGCRCVVRTANALSRAVNVPT IRKFIKFGMTLVSIPIDLLNLREIKPVFNVVKAVRNKISACFNFIKWLFV LLFGWIKISADNKVIYTTEVASKLTCKLVALAFKNAFLTFKWSVVARGAC IIATIFLLWFNFIYANVIFSDFYLPKIGFLPTFVGKIVQWIKNTFSLVTI CDLYSIQDVGFKNQYCNGSIACQFCLAGFDMLDNYKAIDVVQYEADRRAF VDYTGVLKIVIELIVSYALYTAWFYPLFALISIQILTTWLPELLMLSTLH WSVRLLVSLANMLPAHVFMRFYIIIASFIKLFSLFRHVAYGCSKSGCLFC YKRNRSLRVKCSTIVGGMIRYYDVMANGGTGFCSKHQWNCIDCDSYKPGN TFITVEAALDLSKELKRPIQPTDVAYHTVTDVKQVGCYMRLFYDRDGQRT YDDVNASLFVDYSNLLHSKVKSVPNMHVVVVENDADKANFLNAAVFYAQS LFRPILMVDKILITTANTGTSVTETMFDVYVDTFLSMFDVDKKSLNALIA TAHSSIKQGTQICKVLDTFLSCARKSCSIDSDVDTKCLADSVMSAVSAGL ELTDESCNNLVPTYLKGDNIVAADLGVLIQNSAKHVQGNVAKIAGVSCIW SVDAFNQLSSDFQHKLKKACCKTGLKLELTYNKQMANVSVLTTPFSLKGG AVFSYFVYVCFVLSLVCFIGLWCLMPTYTVHKSDFQLPVYASYKVLDNGV IRDVSVEDVCFANKFEQFDQWYESTFGLSYYSNSMACPIVVAVVDQDFGS TVFNVPTKVLRYGYHVLHFITHALSADGVQCYTPHSQISYSNFYASGCVL SSACTMFAMADGSPQPYCYTDGLMQNASLYSSLVPHVRYNLANAKGFIRL PEVLREGLVRIVRTRSMSYCRVGLCEEADEGICFNFNGSWVLNNDYYRSL PGTFCGRDVFDLIYQLFKGLAQPVDFLALTASSIAGAILAVIVVLGFYYL IKLKRAFGDYTSIVFVNVIVWCVNFMMLFVFQVYPTLSCVYAICYFYATL YFPSEISVIMHLQWLVMYGTIMPLWFCLLYISVVVSNHAFWVFSYCRQLG TSVRSDGTFEEMALTTFMITKDSYCKLKNSLSDVAFNRYLSLYNKYRYYS GKMDTAAYREAACSQLAKAMDTFTNNNGSDVLYQPPTASVSTSFLQSGIV KMVNPTSKVEPCIVSVTYGNMTLNGLWLDDKVYCPRHVICSASDMTNPDY TNLLCRVTSSDFTVLFDRLSLTVMSYQMQGCMLVLTVTLQNSRTPKYTFG VVKPGETFTVLAAYNGKPQGAFHVTMRSSYTIKGSFLCGSCGSVGYVIMG DCVKFVYMHQLELSTGCHTGTDFNGDFYGPYKDAQVVQLPVQDYIQSVNF VAWLYAAILNNCNWFVQSDKCSVEDFNVWALSNGFSQVKSDLVIDALASM TGVSLETLLAAIKRLKNGFQGRQIMGSCSFEDELTPSDVYQQLAGIKLQS KRTRLVKGIVCWIMASTFLFSCIITAFVKWTMFMYVTTNMLSITFCALCV ISLAMLLVKHKHLYLTMYIIPVLFTLLYNNYLVVYKQTFRGYVYAWLSYY VPSVEYTYTDEVIYGMLLLIGMVFVTLRSINHDLFSFIMFVGRVISVVSL WYMGSNLEEEILLMLASLFGTYTWTTALSMAAAKVIAKWVAVNVLYFTDI PQIKIVLVCYLFIGYIISCYWGLFSLMNSLFRMPLGVYNYKISVQELRYM NANGLRPPKNSFEALMLNFKLLGIGGVPIIEVSQFQSKLTDVKCANGGLL NCLQHLHVASNSKLWQYCSTLHNEILATSDLGVAFEKLAQLLIVLFANPA AVDSKCLTSIEEVCDDYAKDNTVLQALQSEFVNMASFVEYEVAKKNLDEA CSSGSANQQQLKQLEKACNIAKSAYERDRAVARKLERMADLALTNMYKEA RINDKKSKVVSALQTMLFSMVRKLDNQALNSILDNAVKGCVPLNAIPSLA ANTLTIIVPDKSVYDQVVDNVYVTYAGNVWQIQTIQDSDGTNKQLHEISD DCNWPLVIIANRHNEVSATVLQNNELMPAKLKTQVVNSGPDQTCNTPTQC YYNNSYNGKIVYAILSDVDGLKYTKILKDDGNFVVLELDPPCKFTVQDVK GLKIKYLYFVKGCNTLARGWVVGTISSTVRLQAGTATEYASNSSILSLCA FSVDPKKTYLDFIQQGGTPIANCVKMLCDHAGTGMAITVKPDATTSQDSY GGASVCIYCRARVEHPDVDGLCKLRGKFVQVPVGIKDPVSYVLTHDVCQV CGFWRDGSCSCVSTDTTVQSKDTNFLNGFGVRV
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
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Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix