Visitors: | 312927 |
---|---|
# of TMPs: | 15327 |
Server version: | v2.0.0 |
Database release: | d.2.2 |
Release date: | 22.07.2024 |
HTP viewer for R1A_CVMJH
R1A_CVMJH
Replicase polyprotein 1a
Evidence:
Exists
Reliability:
85.41
# of TM segments:
8
Cross ref(s)::
UniProt: R1A_CVMJH
MAKMGKYGLGFKWAPEFPWMLPNASEKLGNPERSEEDGFCPSAAQEPKVK GKTLVNHVRVDCSRLPALECCVQSAIIRDIFVDEDPQKVEASTMMALQFG SAVLVKPSKRLSVQAWAKLGVLPKTPAMGLFKRFCLCNTRECVCDAHVAF QLFTVQPDGVCLGNGRFIGWFVPVTAIPEYAKQWLQPWSILLRKGGNKGS VTSGHFRRAVTMPVYDFNVEDACEEVHLNPRGKYSCKAYALLRGYRGVKP ILFVDQYGCDYTGCLAKGLEDYGDLTLSEMKELSPVWRDSLDNEVVVAWH VDRDPRAVMRLQTLATVRSIEYVGQPIEDMVDGDVVMREPAHLLAPNAIV KRLPRLVETMLYTDSSVTEFCYKTKLCDCGFITQFGYVDCCGDTCGFRGW VPGNMMDGFPCPGCCKSYMPWELEAQSSGVIPEGGVLFTQSTDTVNRESF KLYGHAVVPFGGAAYWSPYPGMWLPVIWSSVKSYSYLTYTGVVGCKAIVQ ETDAICRFLYMDYVQHKCGNLEQRAILGLDDVYHRQLLVNRGDYSLLLEN VDLFVKRRAEFACKFATCGDGLVPLLLDGLVPRSYYLIKSGQAFTSLMVN FSREVVDMCMDMALLFMHDVKVATKYVKKVTGKVAVRFKALGIAVVRKIT EWFDLAVDTAASAAGWLCYQLVNGLFAVANGVITFIQEVPELVKNFVDKF KTFFKVLIDSMSVSILSGLTVVKTASNRVCLAGSKVYEVVQKSLPAYIMP VGCSEATCLVGEIEPAVFEDDVVDVVKAPLTYQGCCKPPSSFEKICIVDK LYMAKCGDQFYPVVVDNDTVGVLDQCWRFPCAGKKVVFNDKPKVKEVPST RKIKIIFALDATFDSVLSKACSEFEVDKDVTLDELLDVVLDAVESTLSPC KEHGVIGTKVCALLERLVDDYVYLFDEGGEEVIASRMYCSFSAPDEDCVA TDVVYADENQDDDADDPVVLVADTQEEDGVAREQVDSADSEICVAHTGGQ EMTEPDVVGSQTPIASAEETEVGEACDREGIAEVKATVCADALDACPDQV EAFDIEKVEDSILSELQTELNAPADKTYEDVLAFDAIYSETLSAFYAVPS DETHFKVCGFYSPAIERTNCWLRSTLIVMQSLPLEFKDLGMQKLWLSYKA GYDQCFVDKLVKSAPKSIILPQGGYVADFAYFFLSQCSFKVHANWRCLKC GMELKLQGLDAVFFYGDVVSHMCKCGNSMTLLSADIPYTFDFGVRDDKFC AFYTPRKVFRAACAVDVNDCHSMAVVDGKQIDGKVVTKFNGDKFDFMVGH GMTFSMSPFEIAQLYGSCITPNVCFVKGDVIKVLRRVGAEVIVNPANGRM AHGAGVAGAIAKAAGKAFINETADMVKAQGVCQVGGCYESTGGKLCKKVL NIVGPDARGHGNECYSLLERAYQHINKCDNVVTTLISAGIFSVPTDVSLT YLLGVVTKNVILVSNNQDDFDVIEKCQVTSVAGTKALSFQLAKNLCRDVK FVTNACSSLFSESSFVSSYDVLQEVEALRHDIQLDDDARVFVQANMDCLP TDWRLVNKFDSVDGVRTIKYFECPGEVFVSSQGKKFGYVQNGSFKEASVS QIRALLANKVDVLCTVDGVNFRSCCVAEGEVFGKTLGSVFCDGINVTKVR CSAIHKGKVFFQYSGLSAADLAAVKDAFGFDEPQLLQYYSMLGMCKWPVV VCGNYFAFKQSNNNCYINVACLMLQHLSLKFPKWQWRRPGNEFRSGKPLR FVSLVLAKGSFKFNEPSDSTDFIRVELREADLSGATCDLEFICKCGVKQE QRKGVDAVMHFGTLDKSGLVKGYNIACTCGDKLVHCTQFNVPFLICSNTP EGKKLPDDVVAANIFTGGSVGHYTHVKCKPKYQLYDACNVSKVSEAKGNF TDCLYLKNLKQTFSSVLTTYYLDDVKCVAYKPDLSQYYCESGKYYTKPII KAQFRTFEKVEGVYTNFKLVGHDIAEKLNAKLGFDCNSPFMEYKITEWPT ATGDVVLASDDLYVSRYSGGCVTFGKPVIWRGHEEASLKSLTYFNRPSVV CENKFNVLPVDVSEPTDRRPVPSAVLVTGAASGADASAISTEPGTAKEQK ACASDSVEDQIVMEAQKKSSVTTVAVKEVKLNGVKKPVKWNCSVVVNDPT SETKVVKSLSIVDVYDMFLTGCRYVVWTANELSRLINSPTVREYVKWGMS KLIIPANLLLLRDEKQEFVAPKVVKAKAIACYGAVKWFLLYCFSWIKFNT DNKVIYTTEVASKLTFKLCCLAFKNALQTFNWSVVSRGFFLVATVFLLWF NFLYANVILSDFYLPNIGPLPMFVGQIVAWVKTTFGVLTICDFYQVTDLG YRSSFCNGSMVCELCFSGFDMLDNYESINVVQHVVDRRVSFDYISLFKLV VELVIGYSLYTVCFYPLFVLVGMQLLTTWLPEFFMLGTMHWSARLFVFVA NMLPAFTLLRFYIVVTAMYKVYCLCRHVMYGCSKPGCLFCYKRNRSVRVK CSTVVGGSLRYYDVMANGGTGFCTKHQWNCLNCNSWKPGNTFITHEAAAD LSKELKRPVNPTDSAYYSVIEVKQVGCSMRLFYERDGQRVYDDVSASLFV DMNGLLHSKVKGVPETHVVVVENEADKAGFLNAAVFYAQSLYRPMLMVEK KLITTANTGLSVSRTMFDLYVYSLLRHLDVDRKSLTSFVNAAHNSLKEGV QLEQVMDTFVGCARRKCAIDSDVETKSITKSVMAAVNAGVEVTDESCNNL VPTYVKSDTIVAADLGVLIQNNAKHVQSNVAKAANVACIWSVDAFNQLSA DLQHRLRKACVKTGLKIKLTYNKQEANVPILTTPFSLKGGAVFSRVLQWL FVANLICFIVLWALMPTYAVHKSDMQLPLYASFKVIDNGVLRDVSVTDAC FANKFNQFDQWYESTFGLVYYRNSKACPVVVAVIDQDIGHTLFNVPTKVL RYGFHVLHFITHAFATDRVQCYTPHMQIPYDNFYASGCVLSSLCTMLAHA DGTPHPYCYTEGVMHNASLYSSLVPHVRYNLASSNGYIRFPEVVSEGIVR VVRTRSMTYCRVGLCEEAEEGICFNFNSSWVLNNPYYRAMPGTFCGRNAF DLIHQVLGGLVQPIDFFALTASSVAGAILAIIVVLAFYYLIKLKRAFGDY TSVVVINVIVWCINFLMLFVFQVYPTLSCLYACFYFYTTLYFPSEISVVM HLQWLVMYGAIMPLWFCITYVAVVVSNHALWLFSYCRKIGTDVRSDGTFE EMALTTFMITKESYCKLKNSVSDVAFNRYLSLYNKYRYFSGKMDTATYRE AACSQLAKAMETFNHNNGNDVLYQPPTASVTTSFLQSGIVKMVSPTSKVE PCVVSVTYGNMTLNGLWLDDKVYCPRHVICSSADMTDPDYPNLLCRVTSS DFCVMSDRMSLTVMSYQMQGSLLVLTVTLQNPNTPKYSFGVVKPGETFTV LAAYNGRPQGAFHVVMRSSHTIKGSFLCGSCGSVGYVLTGDSVRFVYMHQ LELSTGCHTGTDFSGNFYGPYRDAQVVQLPVQDYTQTVNVVAWLYAAILN RCNWFVQSDSCSLEEFNVWAMTNGFSSIKADLVLDALASMTGVTVEQVLA AIKRLHSGFQGKQILGSCVLEDELTPSDVYQQLAGVKLQSKRTRVIKGTC CWILASTFLFCSIISAFVKWTMFMYVTTHMLGVTLCALCFVIFAMLLIKH KHLYLTMYIMPVLCTLFYTNYLVVGYKQSFRGLAYAWLSYFVPAVDYTYM DEVLYGVVLLVAMVFVTMRSINHDVFSTMFLVGRLVSLVSMWYFGANLEE EVLLFLTSLFGTYTWTTMLSLATAKVIAKWLAVNVLYFTDIPQIKLVLLS YLCIGYVCCCYWGVLSLLNSIFRMPLGVYNYKISVQELRYMNANGLRPPR NSFEALMLNFKLLGIGGVPVIEVSQIQSRLTDVKCANVVLLNCLQHLHIA SNSKLWQYCSTLHNEILATSDLSVAFDKLAQLLVVLFANPAAVDSKCLAS IEEVSDDYVRDNTVLQALQSEFVNMASFVEYELAKKNLDEAKASGSANQQ QIKQLEKACNIAKSAYERDRAVARKLERMADLALTNMYKEARINDKKSKV VSALQTMLFSMVRKLDNQALNSILDNAVKGCVPLNAIPPLTSNTLTIIVP DKQVFDQVVDNVYVTYAPNVWHIQSIQDADGAVKQLNEIDVNSTWPLVIS ANRHNEVSTVVLQNNELMPQKLRTQVVNSGSDMNCNIPTQCYYNTTGTGK IVYAILSDCDGLKYTKIVKEDGNCVVLELDPPCKFSVQDVKGLKIKYLYF VKGCNTLARGWVVGTLSSTVRLQAGTATEYASNSAILSLCAFSVDPKKTY LDYIQQGGVPVTNCVKMLCDHAGTGMAITIKPEATTNQDSYGGASVCIYC RSRVEHPDVDGLCKLRGKFVQVPLGIKDPVSYVLTHDVCQVCGFWRDGSC SCVGTGSQFQSKDTNFLNGFGVQV
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
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Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix