| Visitors: | 312927 |
|---|---|
| # of TMPs: | 15327 |
| Server version: | v2.0.0 |
| Database release: | d.2.2 |
| Release date: | 22.07.2024 |
HTP viewer for RPOA_PRRS1
RPOA_PRRS1
Replicase polyprotein 1ab
Evidence:
3D
Reliability:
59.32
# of TM segments:
13
Cross ref(s)::
MSGILDRCTCTPNARVFVAEGQVYCTRCLSARSLLPLNLQVSELGVLGLF YRPEEPLRWTLPRAFPTVECSPAGACWLSAIFPIARMTSGNLNFQQRMVR VAAEIYRAGQLTPAVLKALQVYERGCRWYPIVGPVPGVAVFANSLHVSDK PFPGATHVLTNLPLPQRPKPEDFCPFECAMATVYDIGHDAVMYVAEGKIS WAPRGGDEVKFEAVPGELKLIANRLRTSFPPHHAVDMSKFAFTAPGCGVS MRVERQHGCLPADTVPEGNCWWSLFDLLPLEVQDKEIRHANQFGYQTKHG VSGKYLQRRLQVNGLRAVTDSNGPIVVQYFSVKESWIRHLKLAGEPSYSG FEDLLRIRVEPNTSPLANTEGKIFRFGSHKWYGAGKRARKARSCATATVA GRALSVRETRQAKEHEVAGADKAEHLKHYSPPAEGNCGWHCISAIANRMV NSIFETTLPERVRPPDDWATDDDLANAIQILRLPAALDRNGACTSAKYVL KLEGEHWTVTVTPGMSPSLLPLECVQGCCEHKGGLGSPDAIEVSGFDPAC LDWLAEVMHLPSSAIPAALAEMSGDSDRSASPVTTVWTVSQFFARHSGGN HPDQVRLGKIISLCQVIEDCCCSQNKTNRVTPEEVAAKIDLYLRGATNLE ECLARLEKARPPRVIDTSFDWDVVLPGVEAATQTNKLPQVNQCRALVPVV TQKSLDNNSVPLTAFSLANYYYRAQGDEVRHRERLTAVLSKLEEVVREEY GLMPTEPGPRPTLPRGLDELKDQMEEDLLRLANAQATSDMMAWAVEQVDL KTWVKNYPRWTPPPPPPKVQPRKTKPVKSLPERKPVPAPRRKVGPDCGSP VSLGGDVPNSWEDLAVSSPLDLPTPPEPATLSSELVIVSSPQCIFRPATP LSEPAPIPAPRGTVSRPVTPLSEPIPVPAPRRKFQQVKRLSSAAAVPLHQ NEPLDLSASSQTEYEASPSAPPQSGGVLGVEGHEAEETLSEISDMSGNIK PASVSSSSSLSSVEITRPKYSAQAIIDSGGPCSGHLQGVKETCLSVMREA CDATKLDDPATQEWLSRMWDRVDMLTWRNTSVCQAIRTLDGRLKFLPKMI LETPPPYPCEFVMMPHTPAPSVGAESDLTIGSVATEDVPRILEKIENVGE MANQEPSAFSEDKPVDDQLVNDPRISSRRPDESTAAPSAGTGGAGSFTDL PSSDGADADGGGPFRTAKRKAERLFDQLSRQVFDLVSHLPVFFSRLFHPG GGYSTGDWGFAAFTLLCLFLCYSYPAFGIAPLLGVFSGTSRRVRMGVFGC WLAFAVGLFKPVSDPVGAACEFDSPECRNILLSFELLKPWDPVRSLVVGP VGLGLAILGRLLGGARCIWHFLLRLGIVADCILAGAYVLSQGRCKKCWGS CIRTAPNEVAFNVFPFTRATRSSLIDLCDRFCAPKGMDPIFLATGWRGCW AGRSPIEQPSEKPIAFAQLDEKKITARTVVAQPYDPNQAVKCLRVLQAGG AMVAEAVPKVVKVSAVPFRAPFFPTGVKVDPDCRVVVDPDTFTAALRSGY STTNLVLGVGDFAQLNGLKIRQISKPSGGGPHLMAALHVACSMALHMLTG IYVTAVGSCGTGTNDPWCANPFAVPGYGPGSLCTSRLCISQHGLTLPLTA LVAGFGIQEIALVVLIFVSIGGMAHRLSCKADMLCILLAIASYVWVPLTW LLCVFPCWLRCFSLHPLTILWLVFFLISVNMPSGILAMVLLVSLWLLGRY TNVAGLVTPYDIHHYTSGPRGVAALATAPDGTYLAAVRRAALTGRTMLFT PSQLGSLLEGAFRTRKPSLNTVNVIGSSMGSGGVFTIDGKVKCVTAAHVL TGNSARVSGVGFNQMLDFDVKGDFAIADCPNWQGAAPKAQFCADGWTGRA YWLTSSGVEPGVIGKGFAFCFTACGDSGSPVITEAGELVGVHTGSNKQGG GIVTRPSGQFCNVAPIKLSELSEFFAGPKVPLGDVKVGSHIIKDISEVPS DLCALLAAKPELEGGLSTVQLLCVFFLLWRMMGHAWTPLVAVSFFILNEV LPAVLVRSVFSFGMFVLSWLTPWSAQILMIRLLTAALNRNRWSLAFFSLG AVTGFVADLAATQGHPLQAVMNLSTYAFLPRMMVVTSPVPVITCGVVHLL AIILYLFKYRGLHQILVGDGVFSAAFFLRYFAEGKLREGVSQSCGMNHES LTGALAMRLNDEDLDFLMKWTDFKCFVSASNMRNAAGQFIEAAYAKALRV ELAQLVQVDKVRGVLAKLEAFADTVAPQLSPGDIVVALGHTPVGSIFDLK VGSTKHTLQAIETRVLAGSKMTVARVVDPTPTPPPAPVPIPLPPKVLENG PNAWGDEDRLNKKKRRRMEALGIYVMGGKKYQKFWDKNSGDVFYEEVHNN TDEWECLRVGDPADFDPEKGTLCGHVTIENKAYHVYISPSGKKFLVPVNP ENGRVQWEAAKLSMEQALGMMNVDGELTAKELEKLKRIIDKLQGLTKEQC LNCLLAASGLTRCGRGGLVVTETAVKIVKFHNRTFTLGPVNLKVASEVEL KDAVEHNQHPVARPIDGGVVLLRSAVPSLIDVLISGADASPKLLAHHGPG NTGIDGTLWDFESEATKEEVALSAQIIQACDIRRGDAPKIGLPYKLYPVR GNPERVKGVLQNTRFGDIPYKTPSDTGSPVHAAACLTPNATPVTDGRSVL ATTMPPGFELYVPTIPASVLDYLDSRPDCPKQLTEHGCEDAALKDLSKYD LSTQGFVLPGVLRLVRKYLFAHVGKCPPVHRPSTYPAKNSMAGINGNRFP TKDIQSVPEIDVLCAQAVRENWQTVTPCTLKKQYCGKKKTRTILGTNNFI ALAHRAALSGVTQGFMKKAFNSPIALGKNKFKELQTSVLGRCLEADLASC DRSTPAIVRWFAANLLYELACAEEHLPSYVLNCCHDLLVTQSGAVTKRGG LSSGDPITSVSNTIYSLVIYAQHMVLSYFKSGHPHGLLFLQDQLKFEDML KVQPLIVYSDDLVLYAESPTMPNYHWWVEHLNLMLGFQTDPKKTAITDSP SFLGCRIINGRQLVPNRDRILAALAYHMKASNVSEYYASAAAILMDSCAC LEYDPEWFEELVVGIAQCARKDGYSFPGTPFFMSMWEKLRSNYEGKKSRV CGYCGAPAPYATACGLDVCIYHTHFHQHCPVTIWCGHPAGSGSCSECKSP VGKGTSPLDEVLEQVPYKPPRTVIMHVEQGLTPLDPGRYQTRRGLVSVRR GIRGNEVELPDGDYASTALLPTCKEINMVAVASNVLRSRFIIGPPGAGKT YWLLQQVQDGDVIYTPTHQTMLDMIRALGTCRFNVPAGTTLQFPVPSRTG PWVRILAGGWCPGKNSFLDEAAYCNHLDVLRLLSKTTLTCLGDFKQLHPV GFDSHCYVFDIMPQTQLKTIWRFGQNICDAIQPDYRDKLMSMVNTTRVTY VEKPVRYGQVLTPYHRDREDDAITIDSSQGATFDVVTLHLPTKDSLNRQR ALVAITRARHAIFVYDPHRQLQGLFDLPAKGTPVNLAVHRDGQLIVLDRN NKECTVAQALGNGDKFRATDKRVVDSLRAICADLEGSSSPLPKVAHNLGF YFSPDLTQFAKLPVELAPHWPVVTTQNNEKWPDRLVASLRPIHKYSRACI GAGYMVGPSVFLGTPGVVSYYLTKFVKGEAQLLPETVFSTGRIEVDCREY LDDREREVAASLPHAFIGDVKGTTVGGCHHVTSRYLPRVLPKESVAVVGV SSPGKAAKALCTLTDVYLPDLEAYLHPETQSKCWKMMLDFKEVRLMVWRD KTAYFQLEGRYFTWYQLASYASYIRVPVNSTVYLDPCMGPALCNRRVVGS THWGADLAVTPYDYGAKIILSSAYHGEMPPGYKILACAEFSLDDPVRYKH TWGFESDTAYLYEFTGNGEDWEDYNDAFRARQEGKIYKATATSLKFHFPP GPVIEPTLGLN
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix