| Visitors: | 312927 |
|---|---|
| # of TMPs: | 15327 |
| Server version: | v2.0.0 |
| Database release: | d.2.2 |
| Release date: | 22.07.2024 |
HTP viewer for RPOA_PRRSS
RPOA_PRRSS
Replicase polyprotein 1ab
Evidence:
Exists
Reliability:
62.08
# of TM segments:
13
Cross ref(s)::
UniProt: RPOA_PRRSS
MSGTFSRCMCTPAARVFWNAGQVFCTRCLSARPLLSPELQDTDLGVVGLF YKPKDKIHWKVPIGIPQVECTPSGCCWLSAVFPLARMTSGNHNFLQRLVK VADVLYRDGCLAPRHLRELQVYERGCSWYPITGPVPGMGLFANSMHVSDQ PFPGATHVLTNSPLPQRACRQPFCPFEEAHSDVYRWKKFVIFTDSSPNGR FRMMWTPESDDSAALEVLPPELERQVEILTRSFPAHHPINLADWELTESP ENGFSFGTSHSCGHIVQNPNVFDGKCWLTCFLGQSAEVCYHEEHLANALG YQTKWGVHGKYLQRRLQVRGMRAVVDPDGPIHVEALSCSQSWVRHLTLNN DVTPGFVRLTSIRIVSNTEPTAFRIFRFGAHKWYGAAGKRARAKRATKSG KDSALAPKIAPPVPTCGITTYSPPTDGSCGWHVLAAIVNRMINGDFTSPL PQYNRPEDDWASDYDLAQAIQCLQLPATVVRNRACPNAKYLIKLNGVHWE VEVRSGMAPRSLSRECVVGVCSEGCVAPPYPADGLPKRALEALASAYRLP SDCVSSGIADFLADPPPQEFWTLDKMLTSPSPERSGFSSLYKLLLEVVPQ KCGATEGAFVYAVERMLKDCPSPEQAMALLAKIKVPSSKAPSVSLDECFP AGVPADFEPAFQERPRSPGAAVALCSPDAKGFEGTASEEAQESGHKAVHA VPLAEGPNNEQVQVVAGEQLELGGCGLAIGSAQSSSDSKRENMHNSREDE PLDLSHPAPAATTTLVGEQTPDNPGSDASALPIAVRGFVPTGPILRHVEH CGTESGDSSSPLDLSFAQTLDQPLDLSLAAWPVKATASDPGWVRGRCEPV FLKPRKAFSDGDSALQFGELSESSSVIEFDQTKDTLVADAPVDLTTSNEA LSAVDPSEFVELRRPRHSAQALIDRGGPLADVHAKIKNRVYEQCLQACEP GSRATPATREWLDKMWDRVDMKTWRCTSQFQAGRILASLKFLPDMIQDTP PPVPRKNRASDNAGLKQLVARWDKKLSVTPPPKSAGLVLDQTVPPPTDIQ QEDATPSDGLSHASDFSSRVSTSWSWKGLMLSGTRLAGSAGQRLMTWVFE VYSHLPAFILTLFSPRGSMAPGDWLFAGVVLLALLLCRSYPILGCLPLLG VFSGSLRRVRLGVFGSWMAFAVFLFSTPSNPVGSSCDHDSPECHAELLAL EQRQLWEPVRGLVVGPSGLLCVILGKLLGGSRHLWHVILRLCMLTDLALS LVYVVSQGRCHKCWGKCIRTAPAEVALNVFPFSRATRNSLTSLCDRFQTP KGVDPVHLATGWRGCWRGESPIHQPHQKPIAYANLDEKKISAQTVVAVPY DPSQAIKCLKVLQAGGAIVDQPTPEVVRVSEIPFSAPFFPKVPVNPDCRI VVDSDTFVAAVRCGYSTAQLVLGRGNFAKLNQTPLRDSASTKTTGGASYT LAVAQVSVWTLVHFILGLWFTSPQVCGRGTADPWCSNPFSYPAYGPGVVC SSRLCVSADGVTLPLFSAVAQLSGREVGIFILVLVSLTALAHRLALKADM LVVFSAFCAYAWPMSSWLICFFPILLKWVTLHPLTMLWVHSFLVFCMPAA GILSLGITGLLWAVGRFTQVAGIITPYDIHQYTSGPRGAAAVATAPEGTY MAAVRRAALTGRTLIFTPSAVGSLLEGAFRTHKPCLNTVNVVGSSLGSGG VFTIDGRKTVVTAAHVLNGDTARVTGDSYNRMHTFKTSGDYAWSHADDWQ GVAPVVKVAKGYRGRAYWQTSTGVEPGVIGEGFAFCFTNCGDSGSPVISE SGDLIGIHTGSNKLGSGLVTTPEGETCAIKETKLSDLSRHFAGPSVPLGD IKLSPAIVPDVTSIPSDLASLLASVPVMEGGLSTVQLLCVFFLLWRMMGH AWTPIVAVGFFLLNEILPAVLVRAVFSFALFILAWATPWSAQVLMIRLLT ASLNRNKLSLAFYALGGVVGLAAEIGAFAGRLPELSQALSTYCFLPRVLA MASYVPIIIIGGLHALGVILWLFKYRCLHNMLVGDGSFSSAFFLRYFAEG NLRKGVSQSCGMSNESLTAALACKLSQADLDFLSSLTNFKCFVSASNMKN AAGQYIEAAYAKALRQELASLVQVDKMKGILSKLEAFAETATPSLDAGDV VVLLGQHPHGSILDINVGTERKTVSVQETRSLGGSKFSVCTVVSNTPVDA LTGIPLQTPTPLFENGPRHRGEEDDLRVERMKKHCVSLGFHNINGKVYCK IWDKSTGDTFYTDDSRYTQDLAFQDRSADYRDRDYEGVQTAPQQGFDPKS ETPIGTVVIGGITYNRYLIKGKEVLVPKPDNCLEAAKLSLEQALAGMGQT CDLTAAEVEKLRRIISQLQGLTTEQALNCLLAASGLTRCGRGGLVVTETA VKIVKYHSRTFTLGPLDLKVTSEAEVKKSTEQGHAVVANLCSGVILMRPH PPSLVDVLLKPGLDTKPGIQPGHGAGNMGVDGSTWDFETAPTKAELELSK QIIQACEVRRGDAPNLQLPYKLYPVRGDPERHGGRLINTRFGDLSYKTPQ DTKSAIHAACCLHPNGAPVSDGKSTLGTTLQHGFELYVPTVPYSVMEYLD SRPDTPFMCTKHGTSKAAAEDLQKYDLSTQGFVLPGVLRLVRRFIFGHIG KAPPLFLPSTYPAKNSMAGINGQRFPTKDVQSIPEIDEMCARAVKENWQT VTPCTLKKQYCSKPKTRTILGTNNFIALAHRSALSGVTQAFMKKAWKSPI ALGKNKFKELHCTVAGRCLEADLASCDRSTPAIVRWFVANLLYELAGCEE YLPSYVLNCCHDLVATQDGAFTKRGGLSSGDPVTSVSNTVYSLIIYAQHM VLSALKMGHEIGLKFLEEQLKFEDLLEIQPMLVYSDDLVLYAERPTFPNY HWWVEHLDLMLGFRTDPKKTVITDKPSFLGCRIEAGRQLVPNRDRILAAL AYHMKAQNASEYYASAAAILMDSCACIDHDPEWYEDLICGIARCARQDGY SFPGPAFFMSMWEKLRSHNEGKKFRHCGICDAKADHASACGLDLCLFHSH FHQHCPVTLSCGHHAGSRECSQCQSPVGAGRSPLDAVLKQIPYKPPRTVI MKVGNKTTALDPGRYQSRRGLVAVKRGIAGNEVDLPDGDYQVVPLLPTCK DINMVKVACNVLLSKFIVGPPGSGKTTWLLSQVQDDDVIYTPTHQTMFDI VSALKVCRYSIPGASGLPFPPPARSGPWVRLVASGHVPGRTSYLDEAGYC NHLDILRLLSKTPLVCLGDLQQLHPVGFDSYCYVFDQMPQKQLTTIYRFG PNICAAIQPCYREKLESKARNTRVVFTTWPVAFGQVLTPYHKDRIGSAIT IDSSQGATFDIVTLHLPSPKSLNKSRALVAITRARHGLFIYDPHNQLQEF FNLIPERTDCNLVFSRGDDLVVLSADNAVTTVAKALGTGPSRFRVSDPRC KSLLAACSASLEGSCMPLPQVAHNLGFYFSPDSPAFAPLPKELAPHWPVV THQNNRAWPDRLVASMRPIDARYSKPMVGAGYVVGPSTFLGTPGVVSYYL TLYIRGEPQALPETLVSTGRIATDCREYLDAAEEEAAKELPHAFIGDVKG TTVGGCHHITSKYLPRTLPKDSVAVVGVSSPGRAAKAMCTLTDVYLPELR PYLQPETASKCWKLKLDFRDVRLMVWKGATAYFQLEGLTWSALPDYARFI QLPKDAVVYIDPCIGPATANRKVVRTTDWRADLAVTPYDYGAQNILTTAW FEDLGPQWKILGLQPFRRAFGFENTEDWAILARRMSDGKDYTDYNWDCVR ERPHAIYGRARDHTYHFAPGTELQVELGKPRLPPGREP
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
