| Visitors: | 312927 |
|---|---|
| # of TMPs: | 15327 |
| Server version: | v2.0.0 |
| Database release: | d.2.2 |
| Release date: | 22.07.2024 |
HTP viewer for RPOA_PRRSV
RPOA_PRRSV
Replicase polyprotein 1ab
Evidence:
Exists
Reliability:
58.7
# of TM segments:
16
Cross ref(s)::
UniProt: RPOA_PRRSV
MSGILDRCTCTPNARVFVAEGQVYCTRCLSARSLLPLNLQVPELGVLGLF YRPEEPLRWTLPRAFPTVECSPAGACWLSAIFPIARMTSGNLNFQQRMVR VAAEIYRAGQLTPTVLKTLQVYERGCRWYPIVGPVPGVGVYANSLHVSDK PFPGATHVLTNLPLPQRPKPEDFCPFECAMADVYDIGRGAVMYVAGGKVS WAPRGGNEVKFEPIPKELKLVANRLHTSFPPHHVVDMSRFTFMTPGSGVS MRVEYQHGCLPADTVPEGNCWWRLFDSLPPEVQYKEIRHANQFGYQTKHG VPGKYLQRRLQVNGLRAVTDTHGPIVIQYFSVKESWIRHLKLVEEPSLPG FEDLLRIRVEPNTSPLAGKDEKIFRFGSHKWYGAGKRARKPRSGATTMVA HHASSAHETRQATKHEGAGANKAEHLKRYSPPAEGNCGWHCISAIANRMV NSNFETTLPERVRPSDDWATDEDLVNTIQILRLPAALDRNGACGSAKYVL KLEGEHWTVSVIPGMSPTLLPLECVQGCCEHKGGLVSPDAVEISGFDPAC LDRLAKVMHLPSSTIPAALAELSDDSNRPVSPAATTWTVSQFYARHRGGD HHDQVCLGKIISLCQVIEDCCCHQNKTNRATPEEVAAKIDQYLRGATSLE ECLAKLERVSPPSAADTSFDWNVVLPGVEAANQTTEQPHVNSCCTLVPPV TQEPLGKDSVPLTAFSLSNCYYPAQGDEVHHRERLNSVLSKLEEVVLEEY GLMSTGLGPRPVLPSGLDELKDQMEEDLLKLANTQATSEMMAWAAEQVDL KAWVKSYPRWTPPPPPPRVQPRRTKSVKSLPEGKPVPAPRRKVRSDCGSP VLMGDNVPNGSEETVGGPLNFPTPSEPMTPMSEPVLVPASRRVPKLMTPL SGSAPVPAPRRTVTTTLTHQDEPLDLSASSQTEYEAFPLAPSQNMGILEA GGQEVEEVLSEISDILNDTNPAPVSSSSSLSSVKITRPKYSAQAIIDSGG PCSGHLQKEKEACLSIMREACDASKLGDPATQEWLSRMWDRVDMLTWRNT SAYQAFRILNGRFEFLPKMILETPPPHPCGFVMLPRTPAPSVSAESDLTI GSVATEDVPRILGKIGDTDELLDRGPSAPSKGEPVCDQPAKDPRMSPRES DESMIAPPADTGGVGSFTDLPSSDGVDVDGGGPLRTVKTKAGRLLDQLSC QVFSLVSHLPIFFSHLFKSDSGYSPGDWGFAAFTLFCLFLCYSYPFFGFA PLLGVFSGSSRRVRMGVFGCWLAFAVGLFKPVSDPVGTACEFDSPECRNV LHSFELLKPWDPVRSLVVGPVGLGLAILGRLLGGARYIWHFLLRLGIVAD CILAGAYVLSQGRCKKCWGSCVRTAPNEIAFNVFPFTRATRSSLIDLCDR FCAPKGMDPIFLATGWRGCWTGRSPIEQPSEKPIAFAQLDEKRITARTVV AQPYDPNQAVKCLRVLQAGGAMVAEAVPKVVKVSAIPFRAPFFPAGVKVD PECRIVVDPDTFTTALRSGYSTANLVLGTGDFAQLNGLKIRQISKPSGGG PHLIAALHVACSMALHMLAGVYVTAVGSCGTGTNDPWCTNPFAVPGYGPG SLCTSRLCISQHGLTLPLTALVAGFGLQEIALVVLIFVSIGGMAHRLSCK ADMLCILLAIASYVWVPLTWLLCVFPCWLRWFSLHPLTILWLVFFLISVN IPSGILAVVLLVSLWLLGRYTNIAGLVTPYDIHHYTSGPRGVAALATAPD GTYLAAVRRAALTGRTMLFTPSQLGSLLEGAFRTQKPSLNTVNVVGSSMG SGGVFTIDGKIKCVTAAHVLTGNSARVSGVGFNQMLDFDVKGDFAIADCP NWQGVAPKAQFCEDGWTGRAYWLTSSGVEPGVIGNGFAFCFTACGDSGSP VITEAGELVGVHTGSNKQGGGIVTRPSGQFCNVKPIKLSELSEFFAGPKV PLGDVKIGSHIIKDTCEVPSDLCALLAAKPELEGGLSTVQLLCVFFLLWR MMGHAWTPLVAVGFFILNEILPAVLVRSVFSFGMFVLSWLTPWSAQVLMI RLLTAALNRNRWSLGFYSLGAVTSFVADLAVTQGHPLQVVMNLSTYAFLP RMMVVTSPVPVIACGVVHLLAIILYLFKYRCLHNVLVGDGVFSSAFFLRY FAEGKLREGVSQSCGMSHESLTGALAMRLTDEDLDFLTKWTDFKCFVSAS NMRNAAGQFIEAAYAKALRIELAQLVQVDKVRGTMAKLEAFADTVAPQLS PGDIVVALGHTPVGSIFDLKVGSTKHTLQAIETRVLAGSKMTVARVVDPT PAPPPVPVPIPLPPKVLENGPNAWGDEDRLSKKKRRRMEAVGIFVMDGKK YQKFWDKNSGDVFYEEVHISTDEWECLRTGDPVDFDPETGIQCGHITIED KVYNVFTSPSGRRFLVPANPENRRAQWEAAKLSVEQALGMMNVDGELTAK ELEKLKRIIDKLQGLTKEQCLNCLLAASGLTRCGRGGLVVTETAVKIVKF HNRTFTLGPVNLKVASEVELKDAVEHNQHPVARPVDGGVVLLRSAVPSLI DVLISGADASPKLLARHGPGNTGIDGTLWDFEAEATKEEVALSAQIIQAC DIRRGDAPEIGLPYKLYPVRGNPERVKGVLQNTRFGDIPYKTPSDTGSPV HAAACLTPNATPVTDGRSVLATTMPSGFELYVPTIPASVLDYLDSRPDCP KQLTEHGCEDAALRDLSKYDLSTQGFVLPGVLRLVRKYLFAHVGKCPPVH RPSTYPAKNSMAGINGNRFPTKDIQSVPEIDVLCAQAVRENWQTVTPCTL KKQYCGKKKTRTILGTNNFIALAHRAALSGVTQGFMKKAFNSPIALGKNK FKELQAPVLGRCLEADLASCDRSTPAIVRWFAANLLYELACAEEHLPSYV LNCCHDLLVTQSGAVTKRGGLSSGDPITSVSNTIYSLVIYAQHMVLSYFK SGHPHGLLFLQDQLKFEDMLKVQPLIVYSDDLVLYAESPSMPNYHWWVEH LNLMLGFQTDPKKTTITDSPSFLGCRIINGRQLVPNRDRILAALAYHMKA SNVSEYYASAAAILMDSCACLEYDPEWFEELVVGIAQCARKDGYSFPGPP FFLSMWEKLRSNHEGKKSRMCGYCGAPAPYATACGLDVCVYHTHFHQHCP VIIWCGHPAGSGSCSECEPPLGKGTSPLDEVLEQVPYKPPRTVIMHVEQG LTPLDPGRYQTRRGLVSVRRGIRGNEVDLPDGDYASTALLPTCKEINMVA VASNVLRSRFIIGPPGAGKTHWLLQQVQDGDVIYTPTHQTMLDMIRALGT CRFNVPAGTTLQFPAPSRTGPWVRILAGGWCPGKNSFLDEAAYCNHLDVL RLLSKTTLTCLGDFKQLHPVGFDSHCYVFDIMPQTQLKTIWRFGQNICDA IQPDYRDKLMSMVNTTRVTYVEKPVRYGQVLTPYHRDREDGAITIDSSQG ATFDVVTLHLPTKDSLNRQRALVAITRARHAIFVYDPHRQLQSMFDLPAK GTPVNLAVHRDEQLIVLDRNNREITVAQALGNGDKFRATDKRVVDSLRAI CADLEGSSSPLPKVAHNLGFYFSPDLTQFAKLPVELAPHWPVVTTQNNER WPDRLVASLRPIHKYSRACIGAGYMVGPSVFLGTPGVVSYYLTKFVRGEA QVLPETVFSTGRIEVDCREYLDDREREVAESLPHAFIGDVKGTTVGGCHH VTSKYLPRFLPKESVAVVGVSSPGKAAKAVCTLTDVYLPDLEAYLHPETQ SRCWKVMLDFKEVRLMVWKDKTAYFQLEGRHFTWYQLASYASYIRVPVNS TVYLDPCMGPALCNRRVVGSTHWGADLAVTPYDYGAKIILSSAYHGEMPP GYKILACAEFSLDDPVRYKHTWGFESDTAYLYEFTGNGEDWEDYNDAFRA RQKGKIYKANATSMRFHFPPGPVIEPTLGLN
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix
Legend:
Inside
Membrane
Outside
Re-entrant loop
Beta barrel inside
Periplasm
Interfacial helix